Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1613 ATGCATGGTTGTTTTGTCGCACTTGCAACACTTTGTGAACAGGAACAGAAGTGGATTGTTGCTGTTATTTCAATGGTCCCTATCTATGCTACTGAGTCTATTATTTCTTTGTGGAATCCGAGATTATCTCTAGCATGTGACATTTTAAGAAACTACTATGAAGCATTTGCCCTGTATTCTTTTGGCCGATACCTGATTGCCTGTCTTGGTGGTGAAGGAAAGGTCGTAGAACTACTAGAAGATGAATCTGGAGAACACCTTAGAAAACCCTTGTTGGATGATTTAGATGAGAATCATGGCATAGAACATAGATCATTTTGCAACTTCTTTTGGCATCCATGCAAGCTTGGAAAAGATCTCCTCACAATAGAAAAATTTGGTCTTGTTCAATATATGATCCTGAAGACTGTTTGTGCATTGTTAGCGTTTATATTGGAACTGTTTGGTGTTTATGGTGATGGGGAATTCAAGTGGTACTACGGGTATCCATATATAGCAGTAGTATTGAACTTCAGCCAGATGTGGGCATTATACTGCCTTGTTCAGTTCTATAATGTTACTCATGAGAGACTTCAACCAATAAAGCCACTTGCAAAGTTCATCAGCTTCAAGGCTATTGTGTTTGCTACTTGGTGGCAAGGTGTTGGTATCGCAGTATTGTGTACATTTGGAGTGCTACCCAATGAGGGAAAATTCCAAACTGGACTGCAAGATTTCTTAATTTGCATAGAGATGGCCATTGCAGCTGTTGCTCATGTGTTTGTATTTTCTGCAACACCATatcattttcttccttcttctgcATATGGAAAAGTCGCAAAGGAAACAATAGAAGCAGCCTTGGAGATAGATGAAGGGAACAAGCATAAACCAGCTGTGCTTAAAGAGACAATGACTCAAGTTGAGGCTCCAAgaacaagcatcacagagagcGTCCAAGATATTGTTGTTGGAGGTGGTCAAAGAGTTGTCAAGGATGTTGTACTGACAATAAATCAAGCAATAGGGCCTGTGGAAAAGGGAGTGACGAGAATTCAGCAAACCTTCCATCACAAAACGGTGGTTTCAtcagatgatgatgatgaagaatcAGATATTCAAGTTGAGAAAGATGTCACAAAATCTTAG 1128 0.375 MHGCFVALATLCEQEQKWIVAVISMVPIYATESIISLWNPRLSLACDILRNYYEAFALYSFGRYLIACLGGEGKVVELLEDESGEHLRKPLLDDLDENHGIEHRSFCNFFWHPCKLGKDLLTIEKFGLVQYMILKTVCALLAFILELFGVYGDGEFKWYYGYPYIAVVLNFSQMWALYCLVQFYNVTHERLQPIKPLAKFISFKAIVFATWWQGVGIAVLCTFGVLPNEGKFQTGLQDFLICIEMAIAAVAHVFVFSATPYHFLPSSAYGKVAKETIEAALEIDEGNKHKPAVLKETMTQVEAPRTSITESVQDIVVGGGQRVVKDVVLTINQAIGPVEKGVTRIQQTFHHKTVVSSDDDDEESDIQVEKDVTKS 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1613 375 Pfam Organic solute transporter Ostalpha 12 261 IPR005178 -
Ssu1g1613 375 PANTHER TRANSMEMBRANE PROTEIN 184C 14 370 - -
Ssu1g1613 375 MobiDBLite consensus disorder prediction 353 375 - -
Ssu1g1613 375 PANTHER ORGANIC SOLUTE TRANSPORTER-RELATED 14 370 IPR005178 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1613 Ssu-Chr1 38238672 38245311 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1613 - - aprc:113852334 661.759