Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1606 ATGGCTTCCAATCTGATTAGAGCGAGCTCAAGCTTGGTTCTAGCTGTTTTAGTAGCTCTCACAGTTCGAATCTTCTACTTCTCACCCATAGATCCAGTTTTGCTGGATATAAGACCTGCGTCTTCAACCAAAGACAACCAATTACAGCATGTCATTAAACTTGGAGAAGGACTTTTGAAGGAACCAGAAGATATTTGTGTGGATAAAGAAGGGACTCTCTATGCAGTTACACGAGATGGTTGGGTTAAAAGATTGCGCAGGAATGGAAATTGGGAGAACTGGAAGCATATAGATAGTGATACCTTGCTAGGATTCACAACAGCAAAAGAAGGTGGTCTCATTGTCTGTGATACTGCCAAGGGTTTGTTCAAGGTCACAGAAGAAGATGGTTTCAGTGTTCTAGTTTCACAAGTAAATGGTTCTCAATTAAGGTTTGCAGACGATGTGATAGAAGCCTCGGACGGGAATATATATTTCAGTGTTGCTAGTAGCAAATTTGATCTTCCAGATTGGTATCTGGATGTGCTAGAGGCAAGACCTCATGGACAACTTCTCAAGTACAATCCCACGTCAAATGAGACTGTTATTGTCCTCGATAACGTTGCCTTTGCTAACGGCGTTGCACTCTCCAAGGACGAAGATTATATTGTGGTCTGTGAAAGTTGGAAATATAGGTGTCTGAGACATTGGTTAAAGGGAGCAAACAAAGGTACAAcagatatattaattgaaaaccTCCCTGGTGCACCTGATAACATCAATCTTGCTCCTGATGGATCTTTCTGGATCGCTTTGATTCAGATGACTTCTGAAGGACTGGAGTTTGTGCACAACTACAAGATAACCAAGCACCTGGTTGCTTCATTTCCAAGGCTAATTAACCTTGTCAATGGTGCAAAGAAGAAAGCAATGGTGGTGAATGTGGCAATTGATGGCAAGATAATCCGAAAGTTTGATGATGGTGATGGGAAGGTGATTAGTTTTGTGACTTCAGCTGTGGAGTTTGAGGACCACCTTTACCTAGGTAGTCTTAATTCCAACTTTGTTGGAAAATTACCACTGTATAGTGCATAG 1074 0.4097 MASNLIRASSSLVLAVLVALTVRIFYFSPIDPVLLDIRPASSTKDNQLQHVIKLGEGLLKEPEDICVDKEGTLYAVTRDGWVKRLRRNGNWENWKHIDSDTLLGFTTAKEGGLIVCDTAKGLFKVTEEDGFSVLVSQVNGSQLRFADDVIEASDGNIYFSVASSKFDLPDWYLDVLEARPHGQLLKYNPTSNETVIVLDNVAFANGVALSKDEDYIVVCESWKYRCLRHWLKGANKGTTDILIENLPGAPDNINLAPDGSFWIALIQMTSEGLEFVHNYKITKHLVASFPRLINLVNGAKKKAMVVNVAIDGKIIRKFDDGDGKVISFVTSAVEFEDHLYLGSLNSNFVGKLPLYSA 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1606 357 Pfam Strictosidine synthase-like, N-terminal 54 85 - -
Ssu1g1606 357 PANTHER STRICTOSIDINE SYNTHASE-RELATED 10 354 - -
Ssu1g1606 357 Pfam Strictosidine synthase 151 233 IPR018119 GO:0009058|GO:0016844
Ssu1g1606 357 Gene3D - 45 355 IPR011042 -
Ssu1g1606 357 SUPERFAMILY Calcium-dependent phosphotriesterase 25 353 - -
Ssu1g1606 357 PANTHER ABC TRANSPORTER PERMEASE PROTEIN-LIKE PROTEIN 10 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1606 Ssu-Chr1 38164067 38175402 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1606 - - gmx:100798788 632.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g1606 1 38164067 38175402 Ssu1g1606 1 38164067 38175402 ECH