Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1603 ATGAGCACGATGCCCATCATTAGCAAACTATACTGTTCATCTTCTCAGACGGTGCTGGGGGTCAGGAGGAGGCCACATGTGGTGAATGGAGGGGGTTTTGTAGTCACGGATTGCAGTGGCCAGAGGGTTGTTTTCAGGGTTGATGGCTGTGGGATTCATGGCACAAAGGGACAGTTGATTCTAAGAGATGGAGAAGGAGATGCTTTACTTCTCATGCGTCGAAagGGAGGCATGGTTGAGGCCCTTAGCATTTACAAGAAGTGGAAAGGTTATAGTCTAGACTATGAAGGATTACAGAACCTGGTTTTCAGCTTGAAGGAACCCAATTCTTGTTTGGTTAAGAGCAATGGGATTAGAATCTCCACTGAGCCCAGGGCTGCTAGTAACAAAGGCTGGGACTTTGAGATCAGGGGTTACTTCCCTGATAGGAGTTGTAGCATTGTTGACAATAGGGGCAACGTAATTGCCCAGGTCGGGGTGAACAAGGAAGTGGAGAAATTAATGGAAAGTAAGGATCTGTATCATGTGGTGGTGAAACCCGGGATGGATCAAGCGTTTGTTTTTGGAGTCATAGCCATCCTTGACTACATTTATGGCGAATCCACATACTGCTGA 615 0.4667 MSTMPIISKLYCSSSQTVLGVRRRPHVVNGGGFVVTDCSGQRVVFRVDGCGIHGTKGQLILRDGEGDALLLMRRKGGMVEALSIYKKWKGYSLDYEGLQNLVFSLKEPNSCLVKSNGIRISTEPRAASNKGWDFEIRGYFPDRSCSIVDNRGNVIAQVGVNKEVEKLMESKDLYHVVVKPGMDQAFVFGVIAILDYIYGESTYC 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1603 204 Gene3D - 5 202 IPR038595 -
Ssu1g1603 204 PANTHER PROTEIN LURP-ONE-RELATED 6 4 203 - -
Ssu1g1603 204 Pfam LURP-one-related 6 193 IPR007612 -
Ssu1g1603 204 PANTHER - 4 203 IPR007612 -
Ssu1g1603 204 SUPERFAMILY Tubby C-terminal domain-like 4 198 IPR025659 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1603 - - gmx:100817988 378.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g1603 1 38117772 38118773 Ssu1g1603 1 38117772 38118773 ECH