Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1596 ATGAATTATTGGGGAAGAATAAATCATAAGAGTGCTAACGATTTTGTGAGGGAATTTGAGGAAGAACATCAAGGTAATGGAGACTGCTTCATGTTTATCCTCTGCCACATTCAAGACGAGTTGTTTGAGGCAGCTGCTGTTGCTCATCCTGAGATGCATAGTCCAACACCAAGGGCAATGTATGGTGTAGATGTCATTTTGGACAGCTCTTTCCAACTCAAGTTACTAGAGATGACTTACGGCCCGGATTGTAAAAGAGCTTGCAAATATGACATGGATATTGGGGTTGGAGAGGGAGGCATTGTCAAAGGTTCGATTAGTATTAACCATTTCTTCAACGTGTTCAGGTGGCTCTCTTTGAATGAAATTTCACAGCTGGAGCTCTTGTCAGGCAGAATACAACGATCCCCTATGGAGGGGTTTGGGGAGGCTCACGCTGCTGAAAATGTAAAAAGCCTTGATGAGACTGAATTTGTAAAAGTTCTCCAGAAGAAATTTGCTCGTCGTGGTGAAGGATATGATTCAGTGCTAGGTGGTGTTCAAGAAACGCCTGCAGAGCTTAACCTTCGGCATAATGTTTCGCTAGACAAAGTACCCAaggcctttttttttcctagtatCTTTTATCTGCAATTTTCTGGAGAATGA 648 0.4136 MNYWGRINHKSANDFVREFEEEHQGNGDCFMFILCHIQDELFEAAAVAHPEMHSPTPRAMYGVDVILDSSFQLKLLEMTYGPDCKRACKYDMDIGVGEGGIVKGSISINHFFNVFRWLSLNEISQLELLSGRIQRSPMEGFGEAHAAENVKSLDETEFVKVLQKKFARRGEGYDSVLGGVQETPAELNLRHNVSLDKVPKAFFFPSIFYLQFSGE 215
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1596 215 Gene3D - 4 104 - -
Ssu1g1596 215 Pfam Tubulin-tyrosine ligase family 16 94 IPR004344 GO:0036211
Ssu1g1596 215 PANTHER TUBULIN--TYROSINE LIGASE-LIKE PROTEIN 12 1 126 IPR027749 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Ssu1g1596 Ssu-Chr1 37873399 37875434 Tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1596 K16609 - gmx:100809212 160.999