Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1589 ATGAGTCTCTTCGGTCTTGGAAACAGAAACCAAAAAACATTTCGTCCAAAAAAGAGTGCTCCATCTGGAAGTAAGGGTGCTCAACTTCAAAAACACATTGATGCAACATTGGGTAGTGGGAACTTGAGGGAAGCTGTTAAACTGCCTCCTGGTGAAGATATTAATGAGTGGCTAGCCGTAAACACCGTGGATTTCTTTAATCAAGTGAATATCCTGTTTGGTACACTTACAGAATTCTGCACACCGAATAACTGCCCTACAATGACTGCAGGACCAAAGTATGAGTATCGATGGGCCGATGGTGTTACTATCAAGAAACCAATAGAGGTATCTGCTCCAAAATATGTTGAGTATttgatggattggattgaatctCAGCTAGATGATGAAACAATTTTCCCCCAAAAATTGGGTATGTTTGACATATTGATAAAGCTAGTGGGCCACCTAGCTGAATTTTCTGGACCGTTATTTGCTAATTATATGCGTCGTAGCTGCATTTTGATTAATTGCTGCATTGCTGTAGGGGCTCCCTTTCCACCCAATTTCCGAGATGTTGTCAAGACAATTTTCAAGCGATTATTCCGTGTATATGCTCACATTTACCATTCACATTTTCAGAAGATAGTGAGTTTGAAGGAAGAAGCTCACCTTAATACTTGCTTCaagcattttgttttgtttacttgGGAATTCCGTTTGATTGACAAAGCAGAGTTGGCACCTCTTGAGGACCTTGTTGAATCTATTATACAGTTATAG 762 0.3806 MSLFGLGNRNQKTFRPKKSAPSGSKGAQLQKHIDATLGSGNLREAVKLPPGEDINEWLAVNTVDFFNQVNILFGTLTEFCTPNNCPTMTAGPKYEYRWADGVTIKKPIEVSAPKYVEYLMDWIESQLDDETIFPQKLGMFDILIKLVGHLAEFSGPLFANYMRRSCILINCCIAVGAPFPPNFRDVVKTIFKRLFRVYAHIYHSHFQKIVSLKEEAHLNTCFKHFVLFTWEFRLIDKAELAPLEDLVESIIQL 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1589 253 PANTHER MPS ONE BINDER KINASE ACTIVATOR-LIKE MOB 2 139 IPR005301 -
Ssu1g1589 253 PANTHER MPS ONE BINDER KINASE ACTIVATOR-LIKE MOB 175 251 IPR005301 -
Ssu1g1589 253 Pfam Mob1/phocein family 35 138 IPR005301 -
Ssu1g1589 253 Pfam Mob1/phocein family 174 243 IPR005301 -
Ssu1g1589 253 MobiDBLite consensus disorder prediction 1 26 - -
Ssu1g1589 253 SUPERFAMILY Mob1/phocein 16 251 IPR036703 -
Ssu1g1589 253 Gene3D MOB kinase activator 3 252 IPR036703 -
Ssu1g1589 253 SMART Mob1_phocein_2 32 243 IPR005301 -
Ssu1g1589 253 PANTHER MOB KINASE ACTIVATOR-LIKE 1A 175 251 - -
Ssu1g1589 253 PANTHER MOB KINASE ACTIVATOR-LIKE 1A 2 139 - -
Ssu1g1589 253 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1589 Ssu-Chr1 37754109 37757920 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1589 K06685 - gmx:100794894 419.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g1589 1 37754109 37757920 Ssu1g1589 1 37754109 37757920 ECH