Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1549 atggGTGATAGCAGTGCTCCCTCTGGGTCTCCAAAGGCAAAACCAGATCTTGTTGATGGAGACTCAGTGGTTTCCAAGGCTGATAACACCACCTCATTGGAAACCATTGTGCAGAGTTTCCAAGATTCAATGTCTCTTGGTAAGAGACACAAGTTCTGGGAAACTCAACCTGTTGGGCAGTACAAGGATGTTGGGGACTCAAGCTTGGCTGAAGGCCCCATTGAGCCCCCAACACCTTTGTCTGAGGTTAAGCAGGAGCCTTATAACCTTCCTAGTGCTTATGAGTGGACCACATGTGACATGGACTCTGAAGAGACCTGTGATGAGGTTTATGTTTTGCTGAAGAATAACTATGTTGAGGATGATGAGAACATGTTCAGGTTCAACTATTCCAAGGAGTTTCTGAGGTGGGCGTTGCGCGTTCCGGGTTATTACCGGAGTTGGCACATTGGTGTGAGGGCCAAGACATCGAAGAAGTTGGTTGCTTTCATCAGTGGCGTCCCGGCCAGGATCAGGGTTAATGCGGAGGTTGTGAAGATGGCTGAGATCAATTTCTTGTGTGTTCATAAGAAGCTCAGGTCGAAGAGACTCGCACCTGTTATGATCAAGGAGGTCACCAGGAGGGTTCATTTGGAGAATATTTGGCAGGCGGCTTATACAGCCGGGGTTGTTCTTCCTACGCCAATCACGACTTGTCAGTATTGGCATCGATCGTTGAATCCAAAGAAGCTAATTGATGTTGGGTTTTCAAGGCTTGGTGCTAGGATGACGATGAGCCGCACTATAAAACTTTACAAGTTGCCTGATAAAACGGTTACTCCTGGGTTCAGGAAAATGGAGCTTCGGGATGTCCCGGCTGTTACTCGGCTGCTTAGGAACTACTTGAGTCAGTTTGTGGTTGCACctgattttgatgaaaatgatgttGAGCATTGGCTTCTTCCCAATGAGAATGTGGTGGATAGTTTCTTGGTGGAGAGTCCAGAGAATCATGAGATCACAGACTTCTGCAGCTTCTATACTCTCCCTTCATCTATCCTTGGAAATCAAAATTACTCAATTTTGAAAGCtgcttattcttattataatgTCTCCACCAAAACTCCACTGACTCAATTGATGAATGATGTGCTAATTGTGGCAAAGCAAAAGGATTTTGATGTTTTCAATGCCTTGGATGTAATGCACAATGAGAATTTCCTCAAAGAGCTCAAGTTTGGACCGGGAGATGGACAGCTTCACTACTACTTGTACAATTATAGGATTCGTAATGCCTTGAAACCATCTGGACTTGGGCTTGTGCTCTTGTAG 1311 0.4432 MGDSSAPSGSPKAKPDLVDGDSVVSKADNTTSLETIVQSFQDSMSLGKRHKFWETQPVGQYKDVGDSSLAEGPIEPPTPLSEVKQEPYNLPSAYEWTTCDMDSEETCDEVYVLLKNNYVEDDENMFRFNYSKEFLRWALRVPGYYRSWHIGVRAKTSKKLVAFISGVPARIRVNAEVVKMAEINFLCVHKKLRSKRLAPVMIKEVTRRVHLENIWQAAYTAGVVLPTPITTCQYWHRSLNPKKLIDVGFSRLGARMTMSRTIKLYKLPDKTVTPGFRKMELRDVPAVTRLLRNYLSQFVVAPDFDENDVEHWLLPNENVVDSFLVESPENHEITDFCSFYTLPSSILGNQNYSILKAAYSYYNVSTKTPLTQLMNDVLIVAKQKDFDVFNALDVMHNENFLKELKFGPGDGQLHYYLYNYRIRNALKPSGLGLVLL 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1549 436 Gene3D - 42 436 - -
Ssu1g1549 436 MobiDBLite consensus disorder prediction 1 30 - -
Ssu1g1549 436 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 234 436 IPR016181 -
Ssu1g1549 436 ProSitePatterns Myristoyl-CoA:protein N-myristoyltransferase signature 1. 182 190 IPR022678 GO:0004379
Ssu1g1549 436 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 48 233 IPR016181 -
Ssu1g1549 436 ProSitePatterns Myristoyl-CoA:protein N-myristoyltransferase signature 2. 405 411 IPR022678 GO:0004379
Ssu1g1549 436 PANTHER N-MYRISTOYL TRANSFERASE 23 436 IPR000903 GO:0004379|GO:0006499
Ssu1g1549 436 PIRSF N-myristl_transf 9 436 IPR000903 GO:0004379|GO:0006499
Ssu1g1549 436 Pfam Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain 73 232 IPR022676 GO:0004379
Ssu1g1549 436 PANTHER GLYCYLPEPTIDE N-TETRADECANOYLTRANSFERASE 23 436 - -
Ssu1g1549 436 Pfam Myristoyl-CoA:protein N-myristoyltransferase, C-terminal domain 246 424 IPR022677 GO:0004379
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1549 Ssu-Chr1 36728001 36729311 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g1549 1 436 Acyl Lipid Metabolism Gene Families AT5G57020 83.066 0.0 760
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1549 K00671 - gmx:100787291 844.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g1549 1 36728001 36729311 Ssu1g1549 1 36728001 36729311 ECH