Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1544 ATGAAGACAAGAAGAATGTGCTACATTCTAATAATGGCTTCAATTCTACTCTCTTGTTTGGTTTGCGTGAAAAGCAAGCCCTTGTTTCTGTTTGATGCTTCAACTCAACAAGCACTTTTCAAACGGTCTTTCACAGTAGCGGATCGAACAACCAGAATTCAAGATGTCTCAAAACATGCTTTTGACCCTACTACGCAGGGGaatgaaagaagaagaatattgaAAGCAAAGGCCAATGGGTATAAAGAAGCATTCAGGGGACTGAGCAGGCTAGGGTCAACACCACCAAGGTGTGAGCACAAATGTGGAGGCTGCATCCCCTGCGACCCAATTCAAATTCCTACCAACAATGATCTTCTGGGTGCTCAGTACGCCAATTACGAGCCTGAAGGATGGAAATGCAAATGTGGCAATGCTTACTTCAACCCATAA 432 0.4236 MKTRRMCYILIMASILLSCLVCVKSKPLFLFDASTQQALFKRSFTVADRTTRIQDVSKHAFDPTTQGNERRRILKAKANGYKEAFRGLSRLGSTPPRCEHKCGGCIPCDPIQIPTNNDLLGAQYANYEPEGWKCKCGNAYFNP 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1544 143 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Ssu1g1544 143 PANTHER EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 4 65 143 IPR039455 GO:0010374
Ssu1g1544 143 PANTHER EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 6 65 143 - -
Ssu1g1544 143 Pfam Epidermal patterning factor proteins 90 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1544 Ssu-Chr1 36636062 36636932 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1544 - - ccaj:109803771 259.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g1544 1 36636062 36636932 Ssu1g1544 1 36636062 36636932 ECH