Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1543 ATGGGATTATCACTTTCCTTACTCTCATCAGCCTGGGAAGAAATCATTAGACATTCGCTCTTTGGTCTGTCTTTGAACTTCAGCTTCGGTTCCAAAGATGGGGCTGTGATTTTGAGAACAGGTAGCTTCAAGAAAAGAGAATCAGAAACTACTAGTGTGCTGTCAAAGGGTTCCGATACCACCAACGGTTCAAGCAAGTTGAAGGATTGCAGACCCGAACACATGATCCTTGAAAGAAACCTTTCATGCGTTAAAGAAATGGAGATCATGGGTTCAGAGAGAAGTGAACAATTGCAGCATAAGCCAGTGCCGGTTCTTTCTCTGCCTAAAGAAGTGGTTTTCTCTTCCCCAAGACCCGTTAGTGAGCTCGACGCTGCAGCAACTAAACTTCAAAAGGTCTACAAGAGTTACCGTACCAGAAGAAACCTTGCAGATTGTGCTGTTGTGGTGGAAGAGCTCTGGTGGAAGGCATTGGACTTTGCTGCTCTCAAACGGAGCTCTGTTTCATTCTTTGATGTGCAGAAACAAGAAACCGCCGTGTCACGGTGGGCAAGAGCAAGGACAAGAGCAGCCAagGTTGGAAAAGGTTTGTCCAAGGATGATAAGGCTCAAAAATTAGCGCTGCAACATTGGCTTGAAGCTATTGACCCACGTCATCGCTATGGACATAATTTGCACATGTATTATGATATTTGGTTTGAAAGCCAAAGCTCCCAACCATTTTTCTACTGGTTGGATGTTGGAGATGGTAAAGAAATAAATCTTGAGAAATGCTCAAGGGCCATCCTACAACGCCAGTGCATTAAATATCTTGGACCAAAAGAAAGGGAAGAGTATGAAGTAATTGTTGAAAACGGGAAGCTGGTGTACAGACAGGATGGGAGGCTCGTGGATACTGATGGAAAGTCCAAATGGATATTTGTTCTTAGCACCGCAAGGGCCTTGTATGTGGGGAGGAAGCAAAAAGGCTCATTTCAACACTCTAGCTTTCTAGCTGGGGCTGCTACAACAGCTGCAGGCAGATTAGTGGCTCAGCAGGGTGTACTTGAGGCTATTTGGCCATATAGCGGCCACTACCACCCCACAGAAgagaatttcaaagaatttataAGCTTTCTCGACGAGCACAATGTAGACCTCTCCAATGTcaagAAATGTGCTATAGATGATGATGCCCCTTCAATTGTTGGGTCCATTTCATTTAGTGACATTAATGAATCACAACAAATTAAGGGTCCCACTCTATCTTCCCAATCAGGCTCGGCAGCTTCCACTACTGTCAACAACAATGGCGTCACAGTTAATGCAACAGTTCATAAAGAGATTGAAAAGAAGGTTGAGGGCCCATTGTTTGACGTGTCCAAGAGGTTGTCATGCAAGTGGTCCACTGGGGCCGGGCCCCGGATCGGGTGTGTGCGGGACTACCCTGAGCACCTTCAATCAAGGGCCTTGGAGCAAGTTAAACTGTCCCCAAGGCCTGCTTCTGCACGCCCATATAGCTACGGCCCAATCCCTTCGCCAAGGCCCAGCCCAAAAGTCAGGATGTCTCCCAGGCTTGCTTACATGGGCTTACCCAGCCCAAGACCCTCAATTCCTGCTGCAAGTTAA 1608 0.4608 MGLSLSLLSSAWEEIIRHSLFGLSLNFSFGSKDGAVILRTGSFKKRESETTSVLSKGSDTTNGSSKLKDCRPEHMILERNLSCVKEMEIMGSERSEQLQHKPVPVLSLPKEVVFSSPRPVSELDAAATKLQKVYKSYRTRRNLADCAVVVEELWWKALDFAALKRSSVSFFDVQKQETAVSRWARARTRAAKVGKGLSKDDKAQKLALQHWLEAIDPRHRYGHNLHMYYDIWFESQSSQPFFYWLDVGDGKEINLEKCSRAILQRQCIKYLGPKEREEYEVIVENGKLVYRQDGRLVDTDGKSKWIFVLSTARALYVGRKQKGSFQHSSFLAGAATTAAGRLVAQQGVLEAIWPYSGHYHPTEENFKEFISFLDEHNVDLSNVKKCAIDDDAPSIVGSISFSDINESQQIKGPTLSSQSGSAASTTVNNNGVTVNATVHKEIEKKVEGPLFDVSKRLSCKWSTGAGPRIGCVRDYPEHLQSRALEQVKLSPRPASARPYSYGPIPSPRPSPKVRMSPRLAYMGLPSPRPSIPAAS 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1543 535 MobiDBLite consensus disorder prediction 498 512 - -
Ssu1g1543 535 PANTHER IQ DOMAIN-CONTAINING PROTEIN IQM3 1 534 IPR044159 -
Ssu1g1543 535 MobiDBLite consensus disorder prediction 489 515 - -
Ssu1g1543 535 MobiDBLite consensus disorder prediction 48 68 - -
Ssu1g1543 535 PANTHER IQ DOMAIN-CONTAINING PROTEIN IQM5 1 534 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1543 Ssu-Chr1 36624201 36627143 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1543 - - gmx:100784098 960.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g1543 1 36624201 36627143 Ssu1g1543 1 36624201 36627143 ECH