Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1516 ATGGCTGCATCATCTGCGAGACTCGCGGTAACAGCGTTGTTGGTGATAGCTTCAGCAACAGCCTCTCTCCAAGCTTCAGCTTCATCCGTGGGTAAATTCGTCGACGAAACCATCTCTTCCCACAGGATCGTTATCTTTTCCAAGACCTATTGTCCGTACTGTAGAAGAGCAAAAGCTGTTTTCAAAGAGTTGAACCAAGTTCCACATGTTGTTGAGCTTGATGAGAGAGAGGATGGTTCAAAGATTCAGGATATCTTGATTAATATTGTTGGGAGGCGTACTGTGCCACAAGTTTTCATTAATGGGAAACACCTTGGAGGCTCAGATGATACCGTTGAAGCTTACGAGAGTGGACGTCTGACTAAACTTCTAGGAATTGAGACAGAGGATCATGATGATCTCTGA 405 0.4469 MAASSARLAVTALLVIASATASLQASASSVGKFVDETISSHRIVIFSKTYCPYCRRAKAVFKELNQVPHVVELDEREDGSKIQDILINIVGRRTVPQVFINGKHLGGSDDTVEAYESGRLTKLLGIETEDHDDL 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1516 134 PANTHER GLUTAREDOXIN 2 10 121 - -
Ssu1g1516 134 TIGRFAM GRX_euk: glutaredoxin 43 124 IPR011899 -
Ssu1g1516 134 SUPERFAMILY Thioredoxin-like 32 124 IPR036249 -
Ssu1g1516 134 ProSitePatterns Glutaredoxin active site. 45 60 IPR011767 -
Ssu1g1516 134 PRINTS Glutaredoxin signature 43 61 IPR014025 -
Ssu1g1516 134 PRINTS Glutaredoxin signature 102 115 IPR014025 -
Ssu1g1516 134 PRINTS Glutaredoxin signature 88 101 IPR014025 -
Ssu1g1516 134 PANTHER BNAA02G04900D PROTEIN 10 121 - -
Ssu1g1516 134 ProSiteProfiles Glutaredoxin domain profile. 31 131 - -
Ssu1g1516 134 CDD GRX_GRXh_1_2_like 42 123 - -
Ssu1g1516 134 Pfam Glutaredoxin 43 104 IPR002109 -
Ssu1g1516 134 Gene3D Glutaredoxin 21 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1516 Ssu-Chr1 35679289 35681456 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g1516 34 124 Miscellaneous Gene Families AT4G15700 32.967 4.54e-11 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1516 K03676 - gmx:100305955 228.794
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g1516 1 35679289 35681456 Ssu1g1516 1 35679289 35681456 ECH