Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1515 ATGGCATACGTAGATCACGCGTTCTCGATTTCGGACGAGGATGTCATGATGGGAACCTCGTACACCGTCAACAACAGACCCCCCATCAAGGAGATCGCCCTCGCCGTTTCCCTCCTCGTCTGTGGCGTCCTCGGCATCGTCATCGGTTCCCTCATGGCCTACAACCGTGTCGGCGGCGACACTGCTCACGGGATCTTCTTTGCAATACTGGGAATAATCTTGTTCATACCGGGTTTCTACTACACGCGGATTGCTTATTATGCTTACAAGGGATACAAAGGGTTCTCTTTCTCTAACATACCCCCTGTGTAG 312 0.5224 MAYVDHAFSISDEDVMMGTSYTVNNRPPIKEIALAVSLLVCGVLGIVIGSLMAYNRVGGDTAHGIFFAILGIILFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1515 103 PANTHER TRANSMEMBRANE-LIKE PROTEIN 3 103 - -
Ssu1g1515 103 PANTHER C20ORF30 PROTEIN 3 103 IPR044234 -
Ssu1g1515 103 Pfam Transmembrane proteins 230/134 28 101 IPR008590 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1515 Ssu-Chr1 35673969 35674515 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1515 - - gmx:100500481 184.111