Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1513 ATGGGTCTCGAAATCTTAGAAGAATTTCGGCCAATTACGCCCGTTCGAACCGTTGTTCCAACGGCTAGGACCTTCAAACACGACCTAGGAACAACAAAGGAGGTGCTAAACGAGGATGTTGAAGAGTGCCACACACCCACGTCACCGTCTAAAAAATTGAGGACCCCATTGGTGTGCCCTCCAGCTCCAAAGAAACCTCGAGTGCCCCGGAGAAACAATTTAGACCCACCGACTCAAGGGTTCTTCCCAGTGCCCCACGATCTGGCTTCTGTCTTCGTGCTACGCACGCCCAACCTTCCAAGAAGATCAACGAAGCAAGAACTTTGCTAG 330 0.5121 MGLEILEEFRPITPVRTVVPTARTFKHDLGTTKEVLNEDVEECHTPTSPSKKLRTPLVCPPAPKKPRVPRRNNLDPPTQGFFPVPHDLASVFVLRTPNLPRRSTKQELC 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1513 109 PANTHER OS08G0516600 PROTEIN 1 104 - -
Ssu1g1513 109 MobiDBLite consensus disorder prediction 40 81 - -
Ssu1g1513 109 PANTHER OS08G0516600 PROTEIN 1 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1513 Ssu-Chr1 35597072 35597401 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1513 - K23008 pvu:PHAVU_009G233800g 159.458