Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1511 ATGATCAAAGGTAAAGATGTTTACGAAGTTGTGGCAGCGCTTGTGCCCCTCTATGTGGCTTTGATCTTAGCCTATGGCTCTGTCCGTTGGTGGAAGATCTTCACCCCTGACCAATGCTCTGGCATAAACCGTTTTGTGGCAGTGTTTGCAGTTCCCTTCCTTTCCTTTCATTTCATATCGACCAATAACCCTTACACTATGAACTTCAAGTTCTTAGCCGCAGACTCACTTCAAAAGGTTGTAGTTTTGGTTGCATTTTTTCTGTGGAACATTTTCACAAAGTGGGGTAGCATAGATTGGACCATCACACTGTTCTCACTTTCCACTCTCCCCAACACACTCATCATGGGTGTCCCTCTTTTAAATGCCATGTACGGAGACTTCACAACCAGCCTTATGATCCAAATTGTGGTTTTGCAATCTGTCATTTGGTACACCCTTTTGTTGTTCATGTTTGAATATAGAGGGGCTAAGCTATTCATTGCAGAACAATTCCCTAAGACTGCAGGGGCCATTGCCTCCCTAAGGGTTGATTCAAATGTTAGCTCTCTCAATGGGAGAGAGCCATTGCAAGCTGATGCAGAAATTGGAGAAAATGGGGAACTTCATGTGGTGGTGAGGAGCATGTCACGTTCTAGGTCCATCACTTCTTCATTCCATAAGTCCTATTCAACACATAGTGCAGCAAATCTTGCTGGGGTAGAGATCTATTCAGTCCAATCATCAATTAGAGAACCAAGATGCCAAAGAGCTTCAAGTTTAAGTAGTACAAATTTGTACCCAACTAGTCTTCTAAGTGCTGATTTAGAAGATGGGGTGTTGAAGATGCATGAGGAAAGCTTTTCGAGGAGCAAGAGTCACAATGTTGGGGTTCTTAATAACGATTTGGTTTCTTCATACCCATTTCTAAAACCAACATTGCTAGTGTCTAACAGTGGTGGCCAAAGAAGCAAAGATATGAATGGTGGCAGGTGGCAGTGCAACTAA 987 0.4296 MIKGKDVYEVVAALVPLYVALILAYGSVRWWKIFTPDQCSGINRFVAVFAVPFLSFHFISTNNPYTMNFKFLAADSLQKVVVLVAFFLWNIFTKWGSIDWTITLFSLSTLPNTLIMGVPLLNAMYGDFTTSLMIQIVVLQSVIWYTLLLFMFEYRGAKLFIAEQFPKTAGAIASLRVDSNVSSLNGREPLQADAEIGENGELHVVVRSMSRSRSITSSFHKSYSTHSAANLAGVEIYSVQSSIREPRCQRASSLSSTNLYPTSLLSADLEDGVLKMHEESFSRSKSHNVGVLNNDLVSSYPFLKPTLLVSNSGGQRSKDMNGGRWQCN 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1511 328 Pfam Membrane transport protein 10 241 IPR004776 GO:0016021|GO:0055085
Ssu1g1511 328 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 273 - -
Ssu1g1511 328 PANTHER AUXIN EFFLUX CARRIER COMPONENT 2 1 273 IPR033526 GO:0010315|GO:0010329
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1511 Ssu-Chr1 35540799 35541785 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g1511 1 260 Organic Solute Cotransporters AT1G73590 64.885 9.10e-116 346
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1511 K13947 - gmx:100788935 387.111