Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1500 ATGAGAATCCAGATTTTATTGCCTTTACTGTTCTTGCAATTAGGAGACAATATATTCGGATCAAGTGCACCTGATGCTGCAGAATCTCTGTTTAAAGCCTTTGGTCCTGCTATGGAATCGGGACTTCCTTGGGCAGCAGTGTTGGGAAACCACGACCAAGAATCAACTATGAATCGTGAAGAATTAATGTCCTTAATCTCCATTATGGATTATTCAGTCTCACAAATCAATCCATCAGATGATGATCTCACTAATCCTACTAAAGGTGGCGTGATGACTAACATTGATGGCTTTGGGAATTATGACCTAAGAGTGTATGGTGCCCCAGGGTCCATGCTGGCAAACAGCACTGTTTtgaatcttttctttcttgacaGTGGAGATAGGGCTGTTTATCAGGGAATTCGAACTTATGGATGGATCAAGGAGTCTCAACTTCAGTGGCTTCGTCGTGTTTCTCAAGAATTCCAGGGACAAAAGCAGGATCCTCTTCATCCTACGGATGCTATTTCCACAGTGAAACCCCCAGCACTTGCATTTTTCCACATCCCAATCCCAGAAATTCCACAGCTGTTCTACAAAGAGATCGTGGGCCAATTTCAAGAGGCCGTGGCGTGTTCGCGGGTGAACTCGGGGGTCCTGCAGACCTTTGTCTCCATGGGAGACGTGAAGGCTGTGTTCATAGGCCACGACCACACCAATGACTTTTGTGGAAACTTGGATGGCATATGGTTTTGTTATGGTGGTGGCTTTGGATACCATGGCTATGGGAAGGCTGGGTGGCCAAGAAGAGCACGGATTATATTGACTGAACTTCAGAAGGGAAAGAAGTCCTGGATGGGCGTAGAGAGAATCATCACTTGGAAACGCCTTGATGATGAGAAGCTGAGCAAGATTGATGAACAAATCCTATGGCAGTCTAGATGA 927 0.4477 MRIQILLPLLFLQLGDNIFGSSAPDAAESLFKAFGPAMESGLPWAAVLGNHDQESTMNREELMSLISIMDYSVSQINPSDDDLTNPTKGGVMTNIDGFGNYDLRVYGAPGSMLANSTVLNLFFLDSGDRAVYQGIRTYGWIKESQLQWLRRVSQEFQGQKQDPLHPTDAISTVKPPALAFFHIPIPEIPQLFYKEIVGQFQEAVACSRVNSGVLQTFVSMGDVKAVFIGHDHTNDFCGNLDGIWFCYGGGFGYHGYGKAGWPRRARIILTELQKGKKSWMGVERIITWKRLDDEKLSKIDEQILWQSR 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1500 308 SUPERFAMILY Metallo-dependent phosphatases 10 268 IPR029052 -
Ssu1g1500 308 PANTHER - 8 307 - -
Ssu1g1500 308 PANTHER INACTIVE PURPLE ACID PHOSPHATASE 28-RELATED 8 307 - -
Ssu1g1500 308 PIRSF Ptase_At2g46880 3 305 IPR011230 -
Ssu1g1500 308 Pfam Calcineurin-like phosphoesterase 9 233 IPR004843 GO:0016787
Ssu1g1500 308 Gene3D - 3 283 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1500 Ssu-Chr1 35184771 35188450 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1500 - - gmx:100818515 568.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g1500 1 35184771 35188450 Ssu1g1500 1 35184771 35188450 ECH