Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1478 ATGAAGACGGCAAAAGATTGGCGCCTAGGCATGGCTGATGTGCAGATCATGCCTGGGTCTCGTCATCGTCCTCCGATGAAGAAGCCAATGTGGATTATTGTCTTGGTTTTATTTGTGTGCTTGTTTCTAGTATGTGCTTATATCTACCCACCAAAAAGCAGTTCAGCTTGTTACATCCTTTCTTCTAGAAGGTGCCGGTCAATTGCTGATTGGCTTCCACCTGTTCCTGTAAGGGAATACACGGATGATGAGATTGCATCGCGTGCTGTTATTAGAGATATTTTGAACGCACCACCAATTCTTTCAAAGAATCGAAAAATTGCCTTCATGTTTTTGACACCTGGTTCTCTACTGTTTGAAAAATTGTGGGATAAATTTTTCCAAGGACATGAAGGGAAATTTTCTGTTTATGTGCATGCATCTAAGACTAAACCAGTTCATGTGAGCCGTTATTTTGTTAATCGGGACATACGCAGTGATCAGGTGGTGTGGGGTAAAATATCTATGGTTGATGCAGAACGACGACTACTGGCGAATGCTTTACAAGATCCTGATAACCAGCAATTTGTTTTACTTTCTGATAGCTGTGTGCCATTGTATACTTTTGACTATATTTTTGATTATCTGATGCATACCAATATCAGCTTTGTTGACAGctTTAAGGATCCTGGTCCTCATGGCAATGGCAGGTATTCAGAACGCATGTTACCGGAAGTTGAGATGAAGGACTTTAGAAAGGGTGCACAGTGGTTTTCGATGAAGCGGCAGCATGCTATTATAGTTATGGCTGACAACCTGTATTACTCAAAATTTCGGGCTTACTGTCAGCCTGGTTTGGAAGGGAAAAATTGCATTGCGGATGAGCATTACTTACCTACATTCTTCCAGATTGTTGATCCTGGTGGAATTGCAAACTGGTCAGTAACTCATGTTGACTGGTCTGAGAGAAAATGGCATCCAAAATCATATAGGGCTCAGGATGTTACGTATGAACTTTTGAAGAATATTACGGTATAG 1017 0.411 MKTAKDWRLGMADVQIMPGSRHRPPMKKPMWIIVLVLFVCLFLVCAYIYPPKSSSACYILSSRRCRSIADWLPPVPVREYTDDEIASRAVIRDILNAPPILSKNRKIAFMFLTPGSLLFEKLWDKFFQGHEGKFSVYVHASKTKPVHVSRYFVNRDIRSDQVVWGKISMVDAERRLLANALQDPDNQQFVLLSDSCVPLYTFDYIFDYLMHTNISFVDSFKDPGPHGNGRYSERMLPEVEMKDFRKGAQWFSMKRQHAIIVMADNLYYSKFRAYCQPGLEGKNCIADEHYLPTFFQIVDPGGIANWSVTHVDWSERKWHPKSYRAQDVTYELLKNITV 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1478 338 Pfam Core-2/I-Branching enzyme 107 336 IPR003406 GO:0016020|GO:0016757
Ssu1g1478 338 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 1 337 IPR044174 GO:0016757
Ssu1g1478 338 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN 1 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1478 Ssu-Chr1 34598690 34603775 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1478 - - gmx:100817202 626.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g1478 1 34598690 34603775 Ssu1g1478 1 34598690 34603775 ECH