Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1464 atGAGTAGCGAAAAGGAAAAAACATCATCTGCACCTTCTTCTTCACGTTCCGTCGAGCTTTGCAAGGGCATCAATGGCCTCGACAAGGTTCTCCTCCGCGAATCCCGTGGCTCCTCAGCCGAGGTGTATCTGTACGGTGGCCACGTGACTTCTTGGAAGAACGACCACGGCGAGGAATTGCTTTTTCTCAGTAGTaagGCTATATTTAAGCCTCCAAAGGCAATTCGTGGAGGGATTCCAATATGCTTTCCACAATTTGGAGGCCTTGGCACCCTTGATCAGCATGGATTTGCTAGAAATCGATTCTGGACCATTGACGATGACCCTCCTCCTTTTCCAACAAATACTTTGAGCAAAGCCTTTGTTGATTTGATTCTTAAGCCCACTGAAGAAGACATGAAGATTTGGCCTCATAGTTTTGAATTCCGTCTTAGGATAGCTTTGGGACCAGGAGGAGATCTGATGCTGACATCTCGGATCAGGAACACAAACAGTGAGGGAAAGCCATTTTCGTTCACCTTTGCATATCATACATATTTCTCTGTATCAGACATAAGTGAAGTTCGGGTAGAGGGATTGGAGACCCTGGATTATCTTGATAACTTGCAGAACAAGGAGCGCTTTACTGAACAGGGGGATGCTTTAACGTTTGAATCAGAAgTTGACAAGATATATCTTAGCACTCCCACAAAGATTGCAATTATTGATcatgaaaaaaagagaacatTTGTTGTGCGCAAAGATGGCCTTCCTGATGCTGTGGTGTGGAATCCTTGGGACAAGAAAGCAAAGGCCATGGCTGATTTTGGTGATGATGAGTACAAGCATATGCTCTGTGTAGAGGCTGCTGCTATTGAAAAGCCCATCACTTTGAAGCCTGGAGAAGAATGGAAAGGAAGGTTAGAGCTTTCAGCTGTTCCCTCTAGTTATTGCAGTGGACAACTTGATCCCCAGAGAGTTCTTCAGGGAAGCTGA 975 0.4431 MSSEKEKTSSAPSSSRSVELCKGINGLDKVLLRESRGSSAEVYLYGGHVTSWKNDHGEELLFLSSKAIFKPPKAIRGGIPICFPQFGGLGTLDQHGFARNRFWTIDDDPPPFPTNTLSKAFVDLILKPTEEDMKIWPHSFEFRLRIALGPGGDLMLTSRIRNTNSEGKPFSFTFAYHTYFSVSDISEVRVEGLETLDYLDNLQNKERFTEQGDALTFESEVDKIYLSTPTKIAIIDHEKKRTFVVRKDGLPDAVVWNPWDKKAKAMADFGDDEYKHMLCVEAAAIEKPITLKPGEEWKGRLELSAVPSSYCSGQLDPQRVLQGS 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1464 324 CDD D-hex-6-P-epi_like 34 304 IPR025532 -
Ssu1g1464 324 PANTHER APOSPORY-ASSOCIATED PROTEIN C-RELATED 10 319 - -
Ssu1g1464 324 Gene3D - 25 310 IPR014718 GO:0030246
Ssu1g1464 324 PIRSF PHexose_mutarotase 5 310 IPR025532 -
Ssu1g1464 324 Pfam Aldose 1-epimerase 29 303 IPR008183 GO:0005975|GO:0016853
Ssu1g1464 324 PANTHER GLUCOSE-6-PHOSPHATE 1-EPIMERASE 10 319 - -
Ssu1g1464 324 SUPERFAMILY Galactose mutarotase-like 24 303 IPR011013 GO:0003824|GO:0005975|GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1464 Ssu-Chr1 33796025 33803658 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1464 K01792 - gmx:100809080 632.484
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g1464 1 33796025 33803658 Ssu1g1464 1 33796025 33803658 ECH
Ssu6g0721 6 11348489 11355351 Ssu1g1464 1 33796025 33803658 PCT