Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1457 ATGGTTAAGGAACTGACAAAGGGAAGCTATAAAATCAAGTATCATGCAGATGGGATTGACAAGGAACCTATTGAAATTGACTTCACTCCACCTTTCAGCAGGATTGACATGATTGAAGAATTAGAGAAGATGGCAAGCCTCAGTATTCCCAAAGACTTGTCAAGTGAGGAAGCTAACCAATATCTGAAGGATGCGTGCTTGATGTATGAGATCAAATGTCCTCCCCCTGAGACAACTGCATGTTTGTTGGATAAACTTGTAGGTCACTTTTTGGAATCGGTTGACCATGTTACTGACGGATTCACAGAATACTAA 315 0.4063 MVKELTKGSYKIKYHADGIDKEPIEIDFTPPFSRIDMIEELEKMASLSIPKDLSSEEANQYLKDACLMYEIKCPPPETTACLLDKLVGHFLESVDHVTDGFTEY 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1457 104 Gene3D Bira Bifunctional Protein; Domain 2 1 100 IPR045864 -
Ssu1g1457 104 PANTHER LYSINE--TRNA LIGASE 1 93 - -
Ssu1g1457 104 SUPERFAMILY Class II aaRS and biotin synthetases 8 93 IPR045864 -
Ssu1g1457 104 PANTHER LYSYL-TRNA SYNTHETASE 1 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1457 Ssu-Chr1 33608146 33609217 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1457 K04567 - gmx:100785660 177.563