Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1448 ATGATTCGCTCCCGAACAGAAGATGCTCCTGCACGCCCTTCACCGCGTGGATGTAGAAAatgcttaaataaaattaattccgATGTAAGTGTTAACTTGACTCTTTTCACTTGTGACCAGAGAAGAAACCTTGACATTAACCTTGCTGAAAGTCAAGAGTGGTTTCCCATATGGGTTTGGAAAAGATTTGAGGCAGAAGAAGCCGAAGAATTAATGGTAGCATGTGAGATAGAGGACCAAAATAGGGAGATTGCAGAAAGGATGGTTAAGGTAGCTTTGTCATGTGTTCAGTATAGGCAAGAATCAAGACCTATAATGAGTGTGGTGGTGAAAATGTTGGAAGGTTCAGTTGAAGTTCCAATACCTCTGAACCCATTTCAACACTTGATTGATGGGACTTTCCCTACTCATCCACTCTCAGCATCACATACCAACATTGATACAAGTACTGGTTTAGGCTCTTCAGTTGTGGTAACCGAATCCAGCCTTGCACCTGCTACTCCTATTGTGACGAAGCTCGAGATTGAATCAGCTTCTACCTAA 543 0.4125 MIRSRTEDAPARPSPRGCRKCLNKINSDVSVNLTLFTCDQRRNLDINLAESQEWFPIWVWKRFEAEEAEELMVACEIEDQNREIAERMVKVALSCVQYRQESRPIMSVVVKMLEGSVEVPIPLNPFQHLIDGTFPTHPLSASHTNIDTSTGLGSSVVVTESSLAPATPIVTKLEIESAST 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1448 180 PANTHER PUTATIVE-RELATED 39 179 - -
Ssu1g1448 180 Gene3D Transferase(Phosphotransferase) domain 1 32 123 - -
Ssu1g1448 180 PANTHER RUST RESISTANCE KINASE LR10-RELATED 39 179 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1448 Ssu-Chr1 33411800 33414327 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g1448 41 157 Receptor kinase-like Gene Family AT1G56120 34.746 1.75e-11 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1448 - - gmx:100819737 221.09