Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1438 ATGCTACAAGTCAGTCCCAAGGCCTACATACCCAACAACATCTCAATTGGCCCTTACCATCATGGAGCACCACACTTGCAAAACATGGAATTTCTGAAAAGGAAGTTCTTTCACCGCCTCTTCGATCCAAATGGTGTAAATGGACCCAAATTAGATGAGGCTTTCAAGTTCCATGAGGAACATGAAGCCAAAGTTCGAGAATGTTACATGGGCGAAATCAAACAAAGCAGTGATGAGTTTCTACAAACGATGCTTGTTGATGGCTCTTTCATCATTCAGCTCTTGAGGGATTTATCACACAACCAATTCAAACAAGTCCCTTCATCCAGTAGATGGATGCTACCCACCTTTCGCCGTGAGTTGATCATGCTTGAAAACCAAAGAGTATGGACAGATAGTGAGGACAAAGAGAGAAAGGGTGACTGGATAGAAGTGAGATGGAGGGAAAAAGGTATTAGGGATAATTAA 468 0.4252 MLQVSPKAYIPNNISIGPYHHGAPHLQNMEFLKRKFFHRLFDPNGVNGPKLDEAFKFHEEHEAKVRECYMGEIKQSSDEFLQTMLVDGSFIIQLLRDLSHNQFKQVPSSSRWMLPTFRRELIMLENQRVWTDSEDKERKGDWIEVRWREKGIRDN 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1438 155 PANTHER PROTEIN, PUTATIVE (DUF247)-RELATED-RELATED 1 127 IPR004158 -
Ssu1g1438 155 Pfam Plant protein of unknown function 3 127 IPR004158 -
Ssu1g1438 155 PANTHER - 1 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1438 Ssu-Chr1 33100927 33102794 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1438 - - gmx:102663948 176.022