Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1407 ATGAGCGATTCAATGACCATGACTGCTGGTACTGACCAATGGATGCAGTTCTATCAACAACCTCTAATGGATGGCCATGGCCATGATCATGCTCTAGCACCAAACACAGAAGGCTTGGCTGATGCAACTGTGATGACAACTAGTCCCACCCCCACCATGCCATCGGAGAGCAATAGCATCTTGAGCCAATTGACACCAAAGGGTAATGTATCCAAACCAATAAGAAGGCGGTCTAGAGCCTCTAAGAGAACCCCAACCACACTCCTCAATGCCAATACCACCAATTTTAGAGCTTTAGTGCAACAATTCACAGGGTGTCCTAGCACAACCATGTCAACACTAGGGGTCCATAAGGGGCCTATTACCTTGAATTTCCAACAAGGAAGTGGACAGAAGATTCACCATAACACAAGTAGAGTAGTGCTACCATTTAGTAGCGGAAGCTACAACAACCAGGTTCATCAAGTGCCTGCACCGCTTCCTTGGCAGAAGCAAGAGGAACAACTGCCTCAGCAGCAGTTGTTGCAACAACAACAGAGTGGTTACTCGTTTGATTTTGTGAAGAGCAATGATTTTCTTCCGAATTCGGGTAAATCAATAAGGCCTAGCACTAGCATGGATGTCTCTGATGGTTTGCTCTTGGATAATAGTGATTTTGGTTTTCCTGATCTAACTGTGAATTCCTTCCCCAGTGATACCTTTTATAAGAATGAATTATAG 720 0.4472 MSDSMTMTAGTDQWMQFYQQPLMDGHGHDHALAPNTEGLADATVMTTSPTPTMPSESNSILSQLTPKGNVSKPIRRRSRASKRTPTTLLNANTTNFRALVQQFTGCPSTTMSTLGVHKGPITLNFQQGSGQKIHHNTSRVVLPFSSGSYNNQVHQVPAPLPWQKQEEQLPQQQLLQQQQSGYSFDFVKSNDFLPNSGKSIRPSTSMDVSDGLLLDNSDFGFPDLTVNSFPSDTFYKNEL 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1407 239 PANTHER VQ MOTIF-CONTAINING PROTEIN 4 232 IPR039609 -
Ssu1g1407 239 MobiDBLite consensus disorder prediction 44 85 - -
Ssu1g1407 239 MobiDBLite consensus disorder prediction 44 69 - -
Ssu1g1407 239 PANTHER VQ MOTIF PROTEIN 4 232 - -
Ssu1g1407 239 Pfam VQ motif 83 109 IPR008889 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1407 Ssu-Chr1 31132403 31133122 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1407 - - gmx:102660944 302.753