Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1406 ATGCAAGCCCTTCCCCGTTTCGCATCCGCCACGCGCCGCGTCGCCGCTCATCTCCGTCACCCCCTTTCCCCTTGTGGACTCCTCTCTTTCTCGACCGATTCGCGAGACGGAGCAGGAGGCGCCTTCGACGCGGGCTGGGACGCCGGCTCATCGTGGTCCACGGGCCTCGCCGGGGCCCACTTCAACGGCCAGTCCCCCTCCGCCGCCCTCGCGGACCTGCAGGACACGGAGGACCGGCTGCGCGAGCTGGAGGCGGAGAACGGCCGAGCCAAGGCCTACGTGAACAGCTGGCAGAGCCGCTTGGCGGAGACCGCCGTGCTGCTCAAGCAGGTCCAGGAGCCCGGCGCGCGAGGCGCGTATCTCAAGGACTCCGAGAAGGCGGAGATGTACCGGCTGCACAAGCAGAACCCCGAGGTCTACACCGTCGAGAGGCTCGCTAGGGATTACAGAGTCATGCGCCAGAGGGTTCACGCAATTCTCTGGCTCAAGGAGATCGAGGAGGACGAGGAGAAGAGGCTCGGCCACCCCCTCGACGATTCCGTCGAGCTCTTGCTCGACACTTGCCCCGAGTTTTTTAATTCGCATGATAGGGAGTTTCATGTTGCGTCTCTTCCGTACAAGCCGGACTTCAAGGTGATGCCGGAGGGGTGGGACGGCATTACCAAAGATGTGGATGAAGTGCATTATGAGATCTCCAAAAAGGAGGATGAAATGCTTTATCGAGAGTTTGTCGAGAAGATGAACTTCAACAAAAAGAAAATGGCTGGAGAGGTAAAATGCCACAAGTATAGTCGACGACGGCCTTCAGATGGATGGACTTTTACAGTAGAGAAACTGGGACACCGGGGAAAACGTGGAGGTGGTGGGGGCTGGAAATTTGCTAGCATGCCAGATGGATCAAGCCGACCGCTGAATGAGATGGAGAAAATGTATGTGAGGCGAGAGACTCCACGCCGGCGACGCAGGATCCTTCCTTGa 978 0.591 MQALPRFASATRRVAAHLRHPLSPCGLLSFSTDSRDGAGGAFDAGWDAGSSWSTGLAGAHFNGQSPSAALADLQDTEDRLRELEAENGRAKAYVNSWQSRLAETAVLLKQVQEPGARGAYLKDSEKAEMYRLHKQNPEVYTVERLARDYRVMRQRVHAILWLKEIEEDEEKRLGHPLDDSVELLLDTCPEFFNSHDREFHVASLPYKPDFKVMPEGWDGITKDVDEVHYEISKKEDEMLYREFVEKMNFNKKKMAGEVKCHKYSRRRPSDGWTFTVEKLGHRGKRGGGGGWKFASMPDGSSRPLNEMEKMYVRRETPRRRRRILP 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1406 325 Coils Coil 73 93 - -
Ssu1g1406 325 PANTHER GB|AAC32909.1 23 325 - -
Ssu1g1406 325 Pfam Eukaryotic mitochondrial regulator protein 121 187 - -
Ssu1g1406 325 PANTHER MUCIN-LIKE PROTEIN 23 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1406 Ssu-Chr1 31119985 31123475 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1406 - - gmx:100804430 531.946