Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1404 ATGACTCTGAGGAAACTAAGATGGGTAATGGATGGAGGAGGGTTTTGGGATTTGGACATTTCCACTCCCAAAACCCTTGATGGTTTGGCATGTCCCGTCCCCGGAGACCCTCTTCCCTTGGCTCTCTCGCGAGGGACAAGGCTTTCCAGACCCAGACAACTCCAATTCATGCACCGTTTCATGCATGCCCCTCTCATTCCCTCCTATGCCCAACCTCACGGCCTCACTCTCCACCGTCTTCTCTCCCTCCCCCTTTCTGATAACTGGTTTGTATTTGTACTGGGTCAGTTCAATTTGCAGAGGTTTGTTTCCTCTGTTCAGAACAGTGAGGAGAAGCCAAAGGCGTTTTCCTCTTGGTTGAAAACCTTTGGGAGACATCTACAGCAGAAGTCCTTGTATGCCCTGGGCCTCTCTTCAGAGTTCCAGTTAGGGCAGGATGATACTTTACTTTTTGGCTTAGAAGATGCATATGACAATACTGATAAGCCTCGTGGGAAGGCGGTCTTTCATCATAAGTTTCCACAGCATGATCTAACAGTGGAGGCTGTTTATCCTGGTCTTTTTGTTGATAAGGCTGGTAACTACTGGGATGTACCATTTTCAATGGCAGTTGATCTTGCTTCTGTGACTACCAGTGACTCTTCCACCGCTTATCATTTGTCTGCGCACTACACTTCAGGGTCACCCATGCagtttgaaaatattcaaaatcaaaatgatagAGTACCACCTACTCTACTTCCAGGCTTGGCGTTCAAAAGTGCCTTTTCTTACAGGAGGAAAGTTGATATTTGGAGAAGTGAAGCTCCTAAGTTGAAATTGGTGCAAccatatgacatatttctttcaaatcctcatgTGTCTGCCTTGGGGATTATTGGTGCTGCTGCAACCACCGCTTTTGGGGACAATTCAGCAAGAGCCCAAGCAAAAGATAGTAGTCCAGGACTTTTTCTCCAGGCTTTTGGATTAAAGTCTTCCTTTCTAGCAGATATATTTGCATCTGTTTCATTTACAGCCCAACATGGAAACTTCCAAAGGCTTTTTCTAGATCTTACCCGATTTCAAGCCCAGTTGGATTTTCCTTCTGGTTTCAAATTTCTTTCAGGTGCAACTGGTCTAACACAAGATCTTCTCAATTCTCAGCAGCCCAGCATGGAAGCTGTTCAGGCGATTTTACCCAATGCTACACTGTCACTTCAGCAGCAGATTGTTGGTCCCGTCAGTTTTAGAGTTGATTCTGGAATTTCCGTTGATCTGAAGAACCCTGATTGGCCTATTCATACACAGGAACCCGTATTTGCTTTGGAATATGCATTGCAAGTACTTGGTTCAGCGAAAGCAGTTGCTTGGTATTGCCCTAAGCGCCATGAGTTTATGGCAGAACTTCGTTTCTATGAAACATAA 1407 0.4378 MTLRKLRWVMDGGGFWDLDISTPKTLDGLACPVPGDPLPLALSRGTRLSRPRQLQFMHRFMHAPLIPSYAQPHGLTLHRLLSLPLSDNWFVFVLGQFNLQRFVSSVQNSEEKPKAFSSWLKTFGRHLQQKSLYALGLSSEFQLGQDDTLLFGLEDAYDNTDKPRGKAVFHHKFPQHDLTVEAVYPGLFVDKAGNYWDVPFSMAVDLASVTTSDSSTAYHLSAHYTSGSPMQFENIQNQNDRVPPTLLPGLAFKSAFSYRRKVDIWRSEAPKLKLVQPYDIFLSNPHVSALGIIGAAATTAFGDNSARAQAKDSSPGLFLQAFGLKSSFLADIFASVSFTAQHGNFQRLFLDLTRFQAQLDFPSGFKFLSGATGLTQDLLNSQQPSMEAVQAILPNATLSLQQQIVGPVSFRVDSGISVDLKNPDWPIHTQEPVFALEYALQVLGSAKAVAWYCPKRHEFMAELRFYET 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1404 468 PANTHER PROTEIN TRIGALACTOSYLDIACYLGLYCEROL 4, CHLOROPLASTIC 3 468 - -
Ssu1g1404 468 PANTHER EXPRESSED PROTEIN 3 468 IPR044160 GO:0034196|GO:0070300|GO:1990052
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1404 Ssu-Chr1 31103503 31107367 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1404 - - ccaj:109803144 848.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g1404 1 31103503 31107367 Ssu1g1404 1 31103503 31107367 ECH