Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1403 ATGACGACGAGTACCCAAGCCTACGGTGAACCATGGTACTGGGACAACCGCTACTCCAACGAACCTGGTCCCTTCGATTGGTACCAAAAGTACCTCACTTTGGCTCCCATCATCAACCTCCATGTCCCTCCTAACCACCCCATCCTCGTTGTTGGTTGTGGCAACTCTGCCTTCAGCGAAGGCATGGTGGTTGATGGCGGTTACACGGATGTTGTCAACATTGATATATCTTCGGTGGTCATTGAAGCTATGAAAACCAAATACCGAGATTGTCCCCAATTGAAATACATGAAAATGGATGTCAGAGACATGAGTGAGTTTGTATCCGAGTCTTTTGGTGCTGTTATTGACAAAGggACTCTTGACTCTATCTTGTGTGGAAATAATTCAAGGCAAAATGCTACAAAAATGCTTGAGGAAATTTGGAGGGTGCTCAAGGATAAAGGAGTTTATGTTCTGGTGACATATGGAGCTCCACTATATCGCCTACGTTTACTACGGGATTCATGCTCGTGGACAATAAAACTCCATGTGATAGAGAAACTTGCCTCAGAAGAGAAATCTGATCATCCAGTTTGGGAGCTGACAAAACCTGTTCCACTTAATGATGATGGAAGCTCTGTGGAGGAAGCCCTAGGACGGAATCCTGAagttcattatatatatatttgcactaagGAAATTTCTGCTAACTCAAACGTAAATGCATGA 711 0.4276 MTTSTQAYGEPWYWDNRYSNEPGPFDWYQKYLTLAPIINLHVPPNHPILVVGCGNSAFSEGMVVDGGYTDVVNIDISSVVIEAMKTKYRDCPQLKYMKMDVRDMSEFVSESFGAVIDKGTLDSILCGNNSRQNATKMLEEIWRVLKDKGVYVLVTYGAPLYRLRLLRDSCSWTIKLHVIEKLASEEKSDHPVWELTKPVPLNDDGSSVEEALGRNPEVHYIYICTKEISANSNVNA 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1403 236 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASES SUPERFAMILY PROTEIN 2 226 - -
Ssu1g1403 236 PANTHER SAM-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN 2 226 - -
Ssu1g1403 236 CDD AdoMet_MTases 48 156 - -
Ssu1g1403 236 Gene3D Vaccinia Virus protein VP39 6 230 IPR029063 -
Ssu1g1403 236 Pfam Methyltransferase domain 49 152 IPR013216 GO:0008168
Ssu1g1403 236 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 8 168 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1403 Ssu-Chr1 31092542 31094820 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1403 - - gmx:100792939 449.899