Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ssu1g1392 | ATGTCTTCCAACACTTTGCTCCACTCTTGCTTCCTCCTCTTCTGTCTCCTCTCAGCTCCTTCCTGTGTTTCCATGCTCTCtgGTATTGAGACAGGAGATTTAGAAAAAAGAGATGATTTGTTTCCACAGATTCTGAGAGATGAGGCGGTGGCAAGGCTATATCAGCTTGGGAAGGTGAGTGATGCTGGTGGTTATTTGGAGAGGACATTCTTGAGTCCTGCATCCATGAGGGCAATTAATGTTATTCGTAAATGGATGGAGGATGCTGGTTTGAGAACTTGGGTGGACCAAATGGGAAATGTACATGGTCGAGTTGATGGTGCAAATGCAAATGCTGAAGCTTTATTGATTGGATCTCACATGGACACTGTTGTTGATGCTGGGATGTTTGATGGATCACTAGGAATAGTCTCTGCAATAGCTGCCTTGAAGGCTTTGCATGTCAATGGAAAGCTGCAAAAGCTAAGGCGCCCTGTTGAGGTGATTGCATTTAGTGATGAAGAGGGTGTCAGATTTCAAACTACTTTCTTGGGCAGTGGTGCTGTAGCTGGAATTTTACCTGCTACAACATTGGAGATATCCTGA | 585 | 0.4444 | MSSNTLLHSCFLLFCLLSAPSCVSMLSGIETGDLEKRDDLFPQILRDEAVARLYQLGKVSDAGGYLERTFLSPASMRAINVIRKWMEDAGLRTWVDQMGNVHGRVDGANANAEALLIGSHMDTVVDAGMFDGSLGIVSAIAALKALHVNGKLQKLRRPVEVIAFSDEEGVRFQTTFLGSGAVAGILPATTLEIS | 194 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ssu1g1392 | 194 | ProSitePatterns | ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. | 115 | 124 | IPR001261 | - | |
| Ssu1g1392 | 194 | Gene3D | Zn peptidases | 35 | 194 | - | - | |
| Ssu1g1392 | 194 | SUPERFAMILY | Zn-dependent exopeptidases | 41 | 190 | - | - | |
| Ssu1g1392 | 194 | Pfam | Peptidase family M28 | 100 | 183 | IPR007484 | - | |
| Ssu1g1392 | 194 | PANTHER | ALLANTOATE DEIMINASE-RELATED | 36 | 193 | - | - | |
| Ssu1g1392 | 194 | PANTHER | ALLANTOATE DEIMINASE-RELATED | 36 | 193 | IPR010158 | GO:0016813 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Ssu1g1392 | Ssu-Chr1 | 30871487 | 30873829 | Dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ssu1g1392 | K02083 | - | gmx:100819399 | 358.607 |