Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1389 ATGGCTTCAACAAGAGATAATGATGAGGCTGAACCCCAAAAAAGCTATTGGAGATGGAGCAAAGAAGATTTCCTGCCAGAGGAGTCCTTCCAAAGCTGGAACAACTACGTTTCTGCCCTTTCACAAACATGGCTAAGGTTCAAGGACCGTCTCTTCAGCAGATCAGACGATGCCACTGAGACAGAAGAACTCAGGAAACGAAGTGAGCATGACATGAAACGTTGCCTCAACTGGTGGGACCTCATATGGTTCGGCTTTGGTGCAGTGATTGGAGCAGGAATCTTTGTGCTCACTGGTCAAGAGGCTCATAACCATGCTGGATCAGCTATTGTCTTATCCTATGTTGCCTCAGGCTTCTCAGCAATGCTTTCTGTTTTCTGCTACACTGAGTTTGCTGTAGAAGTCCCATCAGCAGGAGGGTCTTTTGCTTACTTGAGAGTTGAATTAGGAGACTTTGTTGCTTTCATAACTGCTGGCAACATTCTTCTTGAAAGTGTTATCGGAAGTGCAGCAGTAGCCAGATCATGGACTTCTTACTTCACAAACCTTTTGAACCGTCCCAAGAATTCATTGTGCATCAAAACAAATCTCAAAGAGGGGTACAACTTGTTGGACCCTATAGCTTCCGGGGTTCTGGTAATTGCATCAGTAATTACCATAATCAGCACAAGGAAAACTTCATATCTTAATTGGATAGCATCTGCCATCAACACTGCTGTTATTATATTTGTGATTGTTGCAGGCTTTGTTCATGCTGACACATCAAATTTGACACCCTTTTTACCTTATGGGGCTAAGGGGGTGTTTCAGGCTGCAGCAATTCTTTACTTTGCATATGGAGGGTTTGACAGTATTGCAACCATGGCTGAAGAAACCAAGAAGCCATCAAGGGACATACCAATAGGTTTGATTGGGTCCATGTCCATGATCACAGTGATTTATTGCTTGATGGCACTCTCACTGAGCATGATGCAGAAATACACAGAAATAGACACTGGTGCTGCTTTCTCAGTTGCCTTTCAGAATGTGGGAATGAAGTGGGCAAAGTATGTGGTAGCTTTTGGTGCACTGAAGGGGATGACCACAGTGCTTCTGGTGGCCAGATTGTCACAGGCACGTTATATTACTCATATTGCACGTTGCCACATGATCCCACCATGGTTTGCTCTTGTGCACCCTAAGACCGGAACCCCTATATATGCTACACTCTTGATAACAATTGCAAGTGCCATCATAGCTTTTTTCACAGGCTTGGATGTGTTGTCAAGCTTGATATCTGTGAGCACACTCTTTGTGTTCATGATGATATCAGTTGCCCTTTTGGTGAGGAGGTACTATGTGAGAGGGGTCACACCAAGAGAGAACCTGTTAAAGCTGGTTCTCTTCTTGGTGCTCATTGTTGCTTCCTCAATGGGAATCTCAGCATACTGGGGGCTGAGGCCGAATGGTTGGTTTGGATACACTGTGACTGTTCCTGTTTGGTTCTTGGCAACTCTAGGGATGTCACTATTTTTGACTCAGCAAAGGGTGCCAAGAGTTTGGGGTGTTCCACTTGTCCCATGGTTGCCATCTTTGTCGATTGCAACAAATTTATTCCTCATGGGGTCTTTGGAATATGAAGCCTTCATAAGATTTGGAGTGTGCACTGTGATAATGCTCATCTACTACTTTCTCTTTGGCCTCCACGCAACTTATGATATGGCTCACCAACAAGAAATGCTGCCATCCAAAGTTAACGAAACAGAGACCATTAAGAATGCAGGGCCTTAG 1770 0.4446 MASTRDNDEAEPQKSYWRWSKEDFLPEESFQSWNNYVSALSQTWLRFKDRLFSRSDDATETEELRKRSEHDMKRCLNWWDLIWFGFGAVIGAGIFVLTGQEAHNHAGSAIVLSYVASGFSAMLSVFCYTEFAVEVPSAGGSFAYLRVELGDFVAFITAGNILLESVIGSAAVARSWTSYFTNLLNRPKNSLCIKTNLKEGYNLLDPIASGVLVIASVITIISTRKTSYLNWIASAINTAVIIFVIVAGFVHADTSNLTPFLPYGAKGVFQAAAILYFAYGGFDSIATMAEETKKPSRDIPIGLIGSMSMITVIYCLMALSLSMMQKYTEIDTGAAFSVAFQNVGMKWAKYVVAFGALKGMTTVLLVARLSQARYITHIARCHMIPPWFALVHPKTGTPIYATLLITIASAIIAFFTGLDVLSSLISVSTLFVFMMISVALLVRRYYVRGVTPRENLLKLVLFLVLIVASSMGISAYWGLRPNGWFGYTVTVPVWFLATLGMSLFLTQQRVPRVWGVPLVPWLPSLSIATNLFLMGSLEYEAFIRFGVCTVIMLIYYFLFGLHATYDMAHQQEMLPSKVNETETIKNAGP 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1389 589 Pfam C-terminus of AA_permease 514 563 IPR029485 -
Ssu1g1389 589 Gene3D Amino acid/polyamine transporter I 70 501 - -
Ssu1g1389 589 Pfam Amino acid permease 76 468 IPR002293 GO:0016020|GO:0022857|GO:0055085
Ssu1g1389 589 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 12 575 - -
Ssu1g1389 589 PANTHER CATIONIC AMINO ACID TRANSPORTER 5 12 575 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1389 Ssu-Chr1 30819940 30821709 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g1389 9 571 Organic Solute Cotransporters AT2G34960 75.000 0.0 880
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1389 - - gmx:100802519 1050.81