Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1382 ATGGCATCATCACCAACTCTCTCCAAAATCTCTCTGTCTCTTGTGTTGCTCTTCTTTGTGTCGCTTTCTTCCTCCAATGCAACTTCTCGCCTTACCCATTCCGTAGCCTATTCACCACAATCACAAGCAGAAAAGCTCATAAGAAGCCTTAACCTATTCCCAAAGGACCCAGTTAACATTGTTAAAGGTGACCTTGCTGGTTTTGTCCCAGGGAAGATCGTGGAGAAGAAGTTCTCGTTTCTTGGAGATTCTGGGCCTTCTATTGAAGACCTTGGTCACCATGCAGGCTACTATTCACTTCCTAGTTCCAAAGCTGCAAGCAGGATGTTCTACTTTTTCTTTGAATCACGAAACAGCAAGGATGATCCGGTTGTCATATGGTTAACTGGAGGACCAGGGTGTGGCAGTGAATTGGCTTTGTTTTACGAGAATGGTCCTTTTCACATTGCCAATAACTTGTCTCTTATATGGAATGATTACGGTTGGGACCAGgcatcaaatattttatttgttgaccAACCTACGGGGACAGGTTTTAGTTATTCTTCTGATGATAGTGACATTCGTCATGATGAAGCAGGCATTAGCAATGATTTATATGACTTCTTGCagGAGTTTTTCAAGGCTCATCATGAGTtcgttaaaaatgacttttatattaCTGGAGAATCATATGCTGGACACTATATTCCGGCTCTTGCATCCCGGGTTAACaaaggaaataaagaaaatcaaggaATTCATATAAACCTCAAGGGTTTTGCTATTGGTAATGGGTTAACAAATCCTGCAATTCAATACCAAGCATACCCAGATTTTGCATTAGACAACGGAATAATTACAAAGGCTGAGTACGATGATATCAGCAAGTCAATCCCAGACTGTGGGCAAGTTAATACTTGCGaaactCAAGGTGGACAAAGTTGCGAGATTGCAATTAATAATTGTGAAGAAATATTCGATAGAATCTTGGCCATTGCCGGTGACATTAACTACTACGACATCAGAAAGAAATGTGTGGGAGATTTGTGCTATGACTTCAAAAACTTGGAGACATTGTTAAACCTGCAGAAAGTGAAGAGTGCTTTAGGTGTGCGGGATGACTTGAAGTTTGTTTCATGCAGTAAAACAGTGTATGATGCTATGACCCAAGATTGGATGAGAAACCTGGAAGTGGGGATTCCTGCTCTTCTTGAGGATGGAATCAAGTTGCTTGTGTATGCAGGAGAAGAAGATCTCATATGCAATTGGCTTGGGAATTATAGGTGGGTTCATGCCATGGAGTGGTCAGGCCAAAAGGCGTTTGGAACATCTCCTACAGTGAAATTTGTTGTTGATGGTGCAGAAGCAGGGTCTCTGAATAGCTATGGACCTCTCTCTTTCCTCAAGGTACATGGGGCTGGGCACATGGTCCCTATGGATCAACCAAAAGCTGCACTTCAGATGTTGAAAAGCTGGATGGGTGGAAAACTGACTTTAACAGAAGGAGAGAATTAA 1497 0.4055 MASSPTLSKISLSLVLLFFVSLSSSNATSRLTHSVAYSPQSQAEKLIRSLNLFPKDPVNIVKGDLAGFVPGKIVEKKFSFLGDSGPSIEDLGHHAGYYSLPSSKAASRMFYFFFESRNSKDDPVVIWLTGGPGCGSELALFYENGPFHIANNLSLIWNDYGWDQASNILFVDQPTGTGFSYSSDDSDIRHDEAGISNDLYDFLQEFFKAHHEFVKNDFYITGESYAGHYIPALASRVNKGNKENQGIHINLKGFAIGNGLTNPAIQYQAYPDFALDNGIITKAEYDDISKSIPDCGQVNTCETQGGQSCEIAINNCEEIFDRILAIAGDINYYDIRKKCVGDLCYDFKNLETLLNLQKVKSALGVRDDLKFVSCSKTVYDAMTQDWMRNLEVGIPALLEDGIKLLVYAGEEDLICNWLGNYRWVHAMEWSGQKAFGTSPTVKFVVDGAEAGSLNSYGPLSFLKVHGAGHMVPMDQPKAALQMLKSWMGGKLTLTEGEN 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1382 498 SUPERFAMILY alpha/beta-Hydrolases 92 490 IPR029058 -
Ssu1g1382 498 Gene3D alpha/beta hydrolase 74 495 IPR029058 -
Ssu1g1382 498 Pfam Serine carboxypeptidase 91 488 IPR001563 GO:0004185|GO:0006508
Ssu1g1382 498 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 48-RELATED 35 491 - -
Ssu1g1382 498 ProSitePatterns Serine carboxypeptidases, serine active site. 220 227 IPR018202 GO:0004185
Ssu1g1382 498 PRINTS Carboxypeptidase C serine protease (S10) family signature 171 181 IPR001563 GO:0004185|GO:0006508
Ssu1g1382 498 PRINTS Carboxypeptidase C serine protease (S10) family signature 459 472 IPR001563 GO:0004185|GO:0006508
Ssu1g1382 498 PRINTS Carboxypeptidase C serine protease (S10) family signature 206 231 IPR001563 GO:0004185|GO:0006508
Ssu1g1382 498 PRINTS Carboxypeptidase C serine protease (S10) family signature 158 170 IPR001563 GO:0004185|GO:0006508
Ssu1g1382 498 ProSitePatterns Serine carboxypeptidases, histidine active site. 459 476 IPR033124 GO:0004185
Ssu1g1382 498 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 35 491 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1382 Ssu-Chr1 30437533 30440973 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1382 K16298 - gmx:100798795 843.573