Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1371 ATGTCCAATGgccaaagagagagagaagaagctCTACGTGGCCGTGCTCGGAAACTACGCAGCAGAACTGAAACTTCTCCTCACAACTCTCCTCCTCCTCTGCGTCGTCGCCACGCTCCTCCAGTTCCTCCCTTCCCGCTTCACCATCTCCGCGTCGGATCTCCGCGTCTGCATCTCGAGGGTCACCCAAACAGTCCCCACGGTTTCCAACACAACCACAAACGCCACGTCAGCATCCCCACTCGTCGCATCACTATCCTACACTCCACCCCCGTCGCCGCCTCCGCCGTCACCGCCGCCGTCTCCGCGCCCTCGGAGCAAGTCCTCGCCGGCGGAATCATAAAGCGCGCGTTCAACCCCTACGGCTCCGCGGCCTACAGCTTCGTCACCATGGGCGCGTACAGAGGCGGCCTCAACACGTTCGCCGTCGTCGGCCTCGCGTCGAAGCCTCTCCACGTCTACGCCAAGCCCGCCTACGAGTGCGCGTGGCTCTCACTCGCCGGCGAAAAAATCTCCTCCGCCGCGGGCTACAAGATCCTCCCGGACTGGGGCTACGGCCGCGTCTACACCGTGGTCATCGTGAACTGCACCTTCCCCGTCCCCCTCAACGCCGACAACTCCGGCGGGAAGCTCCTCCTCTACGCCTCCACCTCCGGCGGCGGCGACGCGAGCTTCAACACCACGGACACAATAGAAGCTCTCGCGGAACAGCCCGGAACTCTCGACACCGCGCTGTTCACCTCGAGGCCCAAGTACGATTATCTGTACTGCGGTTCTTCCCTCTACGGGAACCTGAACGCGCAGCGCGTGAGGGAGTGGATCGCGTACCACGTGAAGTTCTTCGGGCCGAGGTCGCATTTCGTGATTCACGACGCGGGTGGGGTGCACGCGCAGGTGCTGGAGGTGCTGAGGCCGTGGATGGAGCTCGGGTACGTGACGGTGCAGGACATAAGGGACCAGGAGAGGTTCGATGGGTATTACCATAACCAGTTCATGGTGGTGAATGATTGCTTGCACAGGTATAAGTTCATGGCCAAGTGGATGTTCTTCTTTGACGTGGATGAGTACATCTATGTGCCGCCCAAGAGTACCATTAAGTCCGTGCTCGATTCGCTCTCCGACTACTCCCAGTTCACCATTGAACAGATGCCAATGAGTAGCAAGCTCTGTCTCTCCGCTGATTACGGCAAAACATATAGGAAATGGGGGTTTGAGAAGCTGGTGTATAGAGATTCAAAGAAGGGAATTAGGAGGGATCGAAAATATGCAGTGCAACCGCGGAGTTTGTATGCAACTGGGGTTCACATGTCCCAGAACCTTGCAGGAAAGACAACTCACAAGACCGAAGGGAAAATAATGTACTATCATTATCATGGAACCATAGCTGAAAGGAGAGAATCGTGTAAAATGCTTATAAATTCTACAGAACTCACGTATGACAAGACCCCTTATGTGTTGGACACCACCATGAGGGACATTGCAGGTGTGATCAAGAAATTTGAGCTCAAGATGATTGGAAATAGGCTACAGAAGACACGGCAATGA 1545 0.5547 MSNGQREREEALRGRARKLRSRTETSPHNSPPPLRRRHAPPVPPFPLHHLRVGSPRLHLEGHPNSPHGFQHNHKRHVSIPTRRITILHSTPVAASAVTAAVSAPSEQVLAGGIIKRAFNPYGSAAYSFVTMGAYRGGLNTFAVVGLASKPLHVYAKPAYECAWLSLAGEKISSAAGYKILPDWGYGRVYTVVIVNCTFPVPLNADNSGGKLLLYASTSGGGDASFNTTDTIEALAEQPGTLDTALFTSRPKYDYLYCGSSLYGNLNAQRVREWIAYHVKFFGPRSHFVIHDAGGVHAQVLEVLRPWMELGYVTVQDIRDQERFDGYYHNQFMVVNDCLHRYKFMAKWMFFFDVDEYIYVPPKSTIKSVLDSLSDYSQFTIEQMPMSSKLCLSADYGKTYRKWGFEKLVYRDSKKGIRRDRKYAVQPRSLYATGVHMSQNLAGKTTHKTEGKIMYYHYHGTIAERRESCKMLINSTELTYDKTPYVLDTTMRDIAGVIKKFELKMIGNRLQKTRQ 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1371 514 MobiDBLite consensus disorder prediction 1 24 - -
Ssu1g1371 514 PANTHER GLYCOSYLTRANSFERASE FAMILY 92 PROTEIN 97 510 - -
Ssu1g1371 514 Pfam Glycosyltransferase family 92 253 488 IPR008166 -
Ssu1g1371 514 MobiDBLite consensus disorder prediction 33 47 - -
Ssu1g1371 514 MobiDBLite consensus disorder prediction 1 47 - -
Ssu1g1371 514 PANTHER UNCHARACTERIZED 97 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1371 Ssu-Chr1 29997808 30002355 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1371 K23869 - gmx:100787815 783.867