Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1369 ATGGAGGAACCCAGAATTTCAACCACGGAGAGCTTGCAAAATGAAAAGCAGATTTTGGTGGATCCACTTTCATTAAAAGACTCTCCTATTAAACCGGGGTACCTTGAAACTACCACCATGCTTCCAACCATAACCACAACTTCATCAAGCATCATTTTGCACCCTCCACCACTACAACCTCCAAAGCCAAGATTCTTAAGCACGAGTCTCCCAAATTCAGCCAACTCATCACCTCGCTTTGCTTCAGCACTTTCCAAGAAGAAACCAAAAGGGGAGAGCCCGGAATCACAATGTCAAGCAAGTAATTTGACCCACAAGCTTCAACATGTACTACAAGAAGTGCACTTAAGGAAGAGCAAGTCATGTGGTGAAGCAAGAGAATTTGCCCCCTCGGATGACTTTGATCACTGGTTAACTAAACTAGGTGCATTGGAGCATGACAAGTGGCACCATGACAACTTCTCCAAAATTGAAGCTGTCAAAGAAAGTCCCAAGAGTGTTAAGCTTAAGCACATGAAAACTACACATGATGGATTTAAATGCAGTGCTCTTTGCCTTTATCTGCCAGGCTTTGGTGGTAAAGTAAAGCCAGTTAAAGCAAGAAAGGAAGAGTCAGAAAAGGGTGGTGCAATGTCTAGGACAGTTTccttagaaaattttgaatgtgGTTCATGGGCTTCTGCAGCAATGTTGAATGAGATTGAAGGAGACTCCACTAACTCCTACTTTGATCTACCAATGGAGTTGATCAAATGCAGTGCCAGTGAAGTGTATTCACCCGTTGCTGGATCTTTTGTTTGGGAAAGAGACCTTAAAGGGATTCTGAAGAATGGTTCCTCTAGAGCCAGTGTTAGAAAATCAGATGCATCGCCTCGCCATGTTCGGTTTTCTACATCATCTTCTGCATCACACCCTGCCTCTCCAGTATCCTGCATCTCTCCCCGTTTGAGAAAGGCCAGAGAAGATTTTAATGCCTTCTTAGCAGCAGCACAAAGTGCATGA 1002 0.4311 MEEPRISTTESLQNEKQILVDPLSLKDSPIKPGYLETTTMLPTITTTSSSIILHPPPLQPPKPRFLSTSLPNSANSSPRFASALSKKKPKGESPESQCQASNLTHKLQHVLQEVHLRKSKSCGEAREFAPSDDFDHWLTKLGALEHDKWHHDNFSKIEAVKESPKSVKLKHMKTTHDGFKCSALCLYLPGFGGKVKPVKARKEESEKGGAMSRTVSLENFECGSWASAAMLNEIEGDSTNSYFDLPMELIKCSASEVYSPVAGSFVWERDLKGILKNGSSRASVRKSDASPRHVRFSTSSSASHPASPVSCISPRLRKAREDFNAFLAAAQSA 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1369 333 MobiDBLite consensus disorder prediction 1 30 - -
Ssu1g1369 333 PANTHER YCF3-INTERACTING PROTEIN 1, CHLOROPLASTIC 1 333 IPR040340 GO:0009535|GO:0048564|GO:0080183
Ssu1g1369 333 MobiDBLite consensus disorder prediction 293 308 - -
Ssu1g1369 333 MobiDBLite consensus disorder prediction 51 98 - -
Ssu1g1369 333 MobiDBLite consensus disorder prediction 282 310 - -
Ssu1g1369 333 MobiDBLite consensus disorder prediction 65 82 - -
Ssu1g1369 333 PANTHER - 1 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1369 Ssu-Chr1 29976246 29977247 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1369 - - gmx:102662703 528.094