Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1337 ATGGTTGCCACAAGCACACATTTAATTGAAGTGGAGTTAATTGTTCTCTccatcattatttttatgaaactaGCTGTCATGACCATGGAATATTTAATACCATTACTGGCATTATGCTCTGTGGTATCTCACTGTTTTTGCTTTTGGCAGAGTGGACATGATGCAGTAGACACTAAACAGAGCACTGCTGATATGACAGCTTTTGTACAAAATCTTCTTCAGCAGATGatagatataataaattctttgcttattgattttcttaattccAATGCACTCGATGAGATGGGCAGCAGGATAGAGGAATTGGAGCAGAGCATCAATGAACTCCGAGCAGAAATTGGAGTGGAGAGCTCACCGGCTCCTTCAGTCACCGAGTCAGAGAAGTCCCCTTTGCATGAGTTGAAGCCTGAGATGGAGAACCACTAA 429 0.3776 MVATSTHLIEVELIVLSIIIFMKLAVMTMEYLIPLLALCSVVSHCFCFWQSGHDAVDTKQSTADMTAFVQNLLQQMIDIINSLLIDFLNSNALDEMGSRIEELEQSINELRAEIGVESSPAPSVTESEKSPLHELKPEMENH 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1337 142 Gene3D - 60 107 - -
Ssu1g1337 142 PANTHER HEAT SHOCK FACTOR-BINDING PROTEIN 1-LIKE 51 129 - -
Ssu1g1337 142 Coils Coil 93 113 - -
Ssu1g1337 142 PANTHER HEAT SHOCK FACTOR BINDING PROTEIN 1 51 129 IPR009643 GO:0003714
Ssu1g1337 142 MobiDBLite consensus disorder prediction 116 142 - -
Ssu1g1337 142 Pfam Heat shock factor binding protein 1 64 112 IPR009643 GO:0003714
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1337 Ssu-Chr1 29371922 29372926 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1337 K19765 - csin:114289523 90.8929