Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1335 ATGCTGGAGCGGTGCCTGGGACCTCGGCGCGTCCGGCAGATGCAGCGCGCGTGTCGGCACAGCACCGTGACCTTCCTCTGCCTCTTCCTCACCGTCATCGTCCTCCGCGGCACCATCGGCGCCGGCAAGTTCGGCACGCCGGGGCAGGACTTTGACGAGATCCGCCACCACCTCTCCGCCGCCCGCACCCGCCGCGTCCTCGAGGAATCCAACCCCAACACCGATTCCAaccccaacaacaacaactacgCCACCTTCGATCTGTCGAAGATCCTCGTGGACGAGCCCCCACCGACGACGAAAAGCGCGACCCCAACAAACCCTACACCCTGGGCCCCAAAATCTCGGACTGGGACGAGCAGCGCCGGGCCTGGCTCCGAGCCAACCCGGACTACCCAAACTTCGTGGGCCCCAACAAGCCCCGCGTCCTCCTCGTCACCGGTTCCTCCCCCAAACCGTGCGAGAACCCGGTCGGCGACCACTACCTCGTGA 492 0.6423 MLERCLGPRRVRQMQRACRHSTVTFLCLFLTVIVLRGTIGAGKFGTPGQDFDEIRHHLSAARTRRVLEESNPNTDSNPNNNNYATFDLSKILVDEPPPTTKSATPTNPTPWAPKSRTGTSSAGPGSEPTRTTQTSWAPTSPASSSSPVPPPNRARTRSATTTS 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1335 163 PANTHER - 4 109 - -
Ssu1g1335 163 MobiDBLite consensus disorder prediction 66 87 - -
Ssu1g1335 163 MobiDBLite consensus disorder prediction 149 163 - -
Ssu1g1335 163 MobiDBLite consensus disorder prediction 105 142 - -
Ssu1g1335 163 MobiDBLite consensus disorder prediction 64 163 - -
Ssu1g1335 163 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE 5-RELATED-RELATED 4 109 IPR008630 GO:0016021|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1335 Ssu-Chr1 29352486 29352977 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g1335 1 114 Glycosyltransferase AT3G62720 46.721 3.66e-29 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1335 K08238 - gmx:100818287 171.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g1335 1 29352486 29352977 Ssu1g1335 1 29352486 29352977 ECH