Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1332 ATGGCACTCAGACCCATCGACAACGCTCTTCCAACAACCCCAGAGAGACCCAAAAAACAACCCAAGATCGCTATTGTTGCAACCCAAAAACAACAAGACCGTGCTTCCGTCAATGGCGAAAACCAGGTTCCATTGCCCCCGTCGGGGGATGCCACTGTTGACTATGTCTCCTCCGACAACCTTAAACCCTTGTCGGACCCCGAAGTTAAGATTCAGAGTTTGGTTGAAGATTTGGATTCAAAAAATTGGACCAAGGTTTGTGAGTCGCTGAATGATGCTAGGCGCTTTGCGTTGTACCACTCCTCTCTTCTATTCCCCATCTTGGGAAAAATTGTGTTGGTGGTGGCGAAGGCGATGAGGAACCCTCGCAGTGCTCTTTGCAAAACCGCTATTATGGCTGCTGCTGATATTTTCAGCGCCTTTGGTGACAAGTTGCTTGACCCTTCTACCTCTGATGCATTTGATGGCTTGCTGCTGCAGCTGCTGCTGAAAGCATCTCAAGATAAAAGGTTTGTGTGTGAAGAAGCTGACAGGGCACTTGGCTCAATGGTGGGTTCCATGACCCCTCTTCCACTGCTTCAGAAACTGAGGGTATATGTGAGTCATACCAACCTTAGGATCAGGGCTAAGGCTGCAGTTTCTCTCTCCAGCTATGTCTCCAAGATGGGGCATGATGAAATGGAGGAGTTTGGGTTGGCTGAACTTATTGAAGTGGCAGCGGATTTACTGAATGATAGACTTCCAGAGGCAAGAGATGCGGCAAGAAGTATTGCAACTTCAGTGTATGAGGCACTGACAAAGGACGCGGAGCAGAAGACGGAGTTGTGGCAGAGCTTCTGCCAATCCAAGTTGCCACCAATTCATGCTCTCTCAATATTGAAAATTGTCAAGCCCTAA 897 0.4838 MALRPIDNALPTTPERPKKQPKIAIVATQKQQDRASVNGENQVPLPPSGDATVDYVSSDNLKPLSDPEVKIQSLVEDLDSKNWTKVCESLNDARRFALYHSSLLFPILGKIVLVVAKAMRNPRSALCKTAIMAAADIFSAFGDKLLDPSTSDAFDGLLLQLLLKASQDKRFVCEEADRALGSMVGSMTPLPLLQKLRVYVSHTNLRIRAKAAVSLSSYVSKMGHDEMEEFGLAELIEVAADLLNDRLPEARDAARSIATSVYEALTKDAEQKTELWQSFCQSKLPPIHALSILKIVKP 298
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1332 298 Gene3D - 49 285 IPR011989 -
Ssu1g1332 298 SUPERFAMILY ARM repeat 71 281 IPR016024 -
Ssu1g1332 298 MobiDBLite consensus disorder prediction 25 45 - -
Ssu1g1332 298 PANTHER CLASP 4 296 - -
Ssu1g1332 298 MobiDBLite consensus disorder prediction 1 49 - -
Ssu1g1332 298 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 4 296 - -
Ssu1g1332 298 Pfam CLASP N terminal 104 271 IPR024395 -
Ssu1g1332 298 SMART TOG_3 60 286 IPR034085 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Ssu1g1332 Ssu-Chr1 29325042 29326568 Dispersed/Wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1332 - - gmx:100819367 517.694