Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1328 ATGGACAGGGAGAGGTTTGAAGTGAAGAATTCACACGGTGATTCTACCAGTCAAAAGATGAACTCGTATTCACAAAATGATACAGATGAGAAAGTGCAAAAGGTGTCTCCCCCACGCAGAAAAGGGTCTAAGGATGAAAAATCTGAAAGGCCTGCAAACTGGATGAAAAGGGATGCCAACGGTTCTGATCTCTTCACTACAAGCTCCAAACAGCAGAGCACAGGGAATTATAGCACTATGTCTAAGGATGAAAAGTCTGAAAGGCCTGCAAACTGGATGAAAAGGGATGCCAATGGTTCTGATCTCTTCACGACAAGCTCCAAACAGCAGAGCACAGGGAATTATAACACCCTGTTGAAAGATGAAAAATCTGAAAGGCCTGAAAACTGGATAAAAAGGGATGCCAACGGTTCTGATCTCTTCACTACAGGCTCCAAGCAGCAGAGCGCTGGGAATTATAACAATATTACCACCGGATCCAGGCTTTGTGAGGCAGAATCCTCTCCTGATGGGAATATCAGTGCAGTACTTGAGGAGGAAGAAGCACTAATTGCTGCTCATCGGAAAGAAATTGAGGATACGATGGAGATTGTTCGTGAAGAAATGAAACTCTTGGCAGAAGTGGACCAACCGGGAAGCCTTATTGACAACTATGTAACCCAATTGAGCTTTGTGCTTTCTCGCAAAGCAGCTAGTCTCGTGGGTCTTCAAGCTCGTCTTGCAAGATTCCAACATCGACTAAAAGAACAGGAGATTCTAAGTAGAAAAAGAGTTCCCCGTCAATAA 786 0.4415 MDRERFEVKNSHGDSTSQKMNSYSQNDTDEKVQKVSPPRRKGSKDEKSERPANWMKRDANGSDLFTTSSKQQSTGNYSTMSKDEKSERPANWMKRDANGSDLFTTSSKQQSTGNYNTLLKDEKSERPENWIKRDANGSDLFTTGSKQQSAGNYNNITTGSRLCEAESSPDGNISAVLEEEEALIAAHRKEIEDTMEIVREEMKLLAEVDQPGSLIDNYVTQLSFVLSRKAASLVGLQARLARFQHRLKEQEILSRKRVPRQ 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1328 261 PANTHER KINESIN-LIKE PROTEIN 1 47 - -
Ssu1g1328 261 MobiDBLite consensus disorder prediction 1 153 - -
Ssu1g1328 261 PANTHER KINESIN-RELATED PROTEIN 6 1 47 - -
Ssu1g1328 261 MobiDBLite consensus disorder prediction 32 56 - -
Ssu1g1328 261 PANTHER KINESIN-LIKE PROTEIN 119 260 - -
Ssu1g1328 261 PANTHER KINESIN-LIKE PROTEIN 44 80 - -
Ssu1g1328 261 PANTHER KINESIN-LIKE PROTEIN 81 118 - -
Ssu1g1328 261 MobiDBLite consensus disorder prediction 98 118 - -
Ssu1g1328 261 Coils Coil 177 208 - -
Ssu1g1328 261 PANTHER KINESIN-RELATED PROTEIN 6 44 80 - -
Ssu1g1328 261 MobiDBLite consensus disorder prediction 119 133 - -
Ssu1g1328 261 MobiDBLite consensus disorder prediction 136 153 - -
Ssu1g1328 261 MobiDBLite consensus disorder prediction 13 31 - -
Ssu1g1328 261 PANTHER KINESIN-RELATED PROTEIN 6 119 260 - -
Ssu1g1328 261 PANTHER KINESIN-RELATED PROTEIN 6 81 118 - -
Ssu1g1328 261 Coils Coil 233 253 - -
Ssu1g1328 261 MobiDBLite consensus disorder prediction 60 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1328 Ssu-Chr1 29259104 29260359 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1328 K10393 - gmx:100819897 466.077