Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1325 ATGGACTCTTGCCCTCCCCACCACTCGCTCGTCGCCTCCGACGTCTTCCTCTCCCTCCTCCTCTCCCCAAACGCCCCCGTTTTCACCCTCTTCACCCCCATCTCCTTCCTCTCCTTCCTCCGCTCCCTCCGCCGCGCCTGCAAAGCCCGCTCCCAACCAGGCCCGGCCCAAGACTCCTCCCAAAACCGCAAACGAAGGCGCCCGGGCCGGGCCCGCGCCAGACACCCCCAAAACGACGACGATTCGCCGGACGCCGGTTCCCGAAACGACCCCAGGGCAATCGTCCGCGTGCTGGAGAAGCTAGTCCAGGTGATGGGATCGATCCACCTGGACCGCTTCCTGGAGACTCTCAAGTCGTTGATTCAGACCGTCGCGGAAATCCCCGTAACCGCGCTCGACACGTGCGGGAACGCGGCGCAGTATAGCAATCTGCTTAACCTGTGTGCGAAGGTCCTCAACGAGGTTCTCAAACCCGAGCACGGAGAACCTTCCGACACTGCCGCTGAGGTGTTGAAATCGTTGTGTTCGCTGGTTCTCATGCCGAAGTCGCAGGCGAGGACCTTCGCTCTCGGGTTCGTCACGAGCCTTGGGAGAGAATGCGACGGAGTGAGGAAAGCGCTGGCTCATTTTCCGCGGTATTTGGCGAGGAAGGCGCCGGAGAAGGCCGAGCCAAGAGCCCTGGCTGTGGATTCCATCATGGAGGTTGTTAGAGTCGTGGATGTTGAGGATCAAATTGCGTTTGTGAAATTCGTGGTGCAGATGGCTCAGGGGAAGTCGAATCTTCGGCTTTTGGCGGTTGATCTTGTTTTGAATCTGGTGACGTCGCTGAGGGATCCGTTGGGAGTGGATTCGGGGAGCGAGGCGTGGGGAGTGTGGTGCTTGGAGGCGTTGGTGAAGCGGTGTTCGGATGTGAATGCCGCGATTCGGGCGCGGGCTTTGTCGAACTTGGCGCAGCTGGTGGGGTTCCTGTCTCGGGATGATAGGACTAGTGTGGTTTTGAAGGAGTTTATGGGGTTTGGCAAGGGTGGTGATGGGGATGGTGAAGGTGGAATGAATGATATGCTGAGGAGGAGGTGTATGGATGATAAGGCAGCTGTGAGGAAATCTGCACTTCTTTTGGTTACTAACTTGACTGCTCTTCTTGGAGGTGCAATTGATGAAGTGGTGCTCAAGACAATGGGCATGGCTTGTTCGGATCCACTTATCAGCATGCGGAAAGCAGCAATTACAGCTCTATCAGAGGCTTTCAGAACATTCTCTGCTGAAACAGTAATAACTGAGTGGCTACATTCAGTTCCACGTCTAATAACTGATAATGAATCAAGCATCCAAGAAGAATGTGAGAACATGTTTCAAGAGCTTGTTTTGGACCGGATATCTAGAGCTGCATCTGCTACCTCTTCATATAGTGTATCTTCCTCTAATAGAAAGATGAAGGGAAAAGGCATAGACAATGAGATGGAGATGCTTTTTCCCAATGGAATTCTGTATTTTCTGAGAGAAATTTGCAATGGGGAGGTGAGCCCTTGGGTGAAGAAAATTTGCACAAAACTGGGCAAAAAGAAACGGCTGAATCACAAAATTGTTACAGCACTTCAAAATATAATCAGGGCATCAGAGTCTATCTGGCTGAGTCACTCCATGCCAATAGAAAAGTGGACTGCCCCACCAGGTGCTTGGTTTCTTTTGTCAGAGGTGTCAACATTCCTTTCAAAAGCAGTGGACTGGGAGTTTCTTCATCATCATTGGCAGCTTCTTGACAAACATGAAGTGGAAGGTGAGTTCAAAAGCCCATTTGTACAAAGAAATGCATGTGCAGAGGAAGAAAGCATAGAATGCAATCCTGTTGCCTGGGCTAGTGACCGAGTTTTCCTCTTACAAACAATTTCTAATGTTTCTGTGGAGCTGCCCTCTGAACCTGCAGCTGATTTGGCTCACAACTTGCTCAAACGGGTTGAAGAATTCAACATGCATTCAACAGAGGTTGACGCTCATTTAAAAGCACTAAAAACATTGTGCAAGCGGAAAGCTTCAAATCTCAAAGAGGCAGAAGCATTAGTCTTGAAATGGGTCCACCAAGTTCTCTCCAGGGCTTCTGAAATAATAGAAAAGTTCATTTCAGAGAACTCAGAGCAAAATACACAAGGTAGCTTCTTCACTCCACCTAGGAGTGGAACTAGGAAAGGCAGCAAATCAGTAGCAATGTCCAAGTCATTGTCTAAAGCAGTTACAGCGATTTATACAGTTGGGTCTTTAGTTATTGTTAGCCCGTCTGCTGATATGAGCAATGTAGTTCCTCTATTGCATACTATCATCACTTCTGGGAGTTCTggtctcaaattaaataaacttccTGGCCCTGCAACTTCTTTACAACAGGAAGCTCCTTCTTTTTATATTCAAGGGTGGCTGGCCATGGGCAAGCTTTGCCTTGCTGATGGGAAGCTAGCCAAGAATTATATTCCTCTGTTTGTACAGGAGCTTGAAAAGAGTGAATCTGCAGCTCTTCGCAACAACATTGTGGTCATGATGGCAGACTTTTGTGTCCGGTACACTGCTCTTGTTGATTGTTACATTACAAAGATCACTAGGTGTCTCTTAGATCCTTGTGAACTTGTGAGAAGGCAAACATTCATATTGCTATCCAGATTGTTGCAGAGGGACTACGTGAAATGGAGAGGAGTGCTATTTCTTCGGTTCCTTTTGTCACTTGTTGACGAATCAGAAAAGATTAGGCAGCTAGCGGATTTTCTCTTTGGAAATATTTTGAAAGTCAAGTCTCCTCTTTTAGCATATAATAGTTTTGTTGAGGCTGTTTTTGTTCTGAATGACTGTCGTGCCCATAATGGACATCGTGAGTCCCATGGCTCAGGAATGGAAAGCCAACTTTTTTCCATCAGGGGTACTGATGAAAAGTCAAGGTCTAAAAGAATGCACATTTATGTTTCTTTACTAAAACAAATGGCTCCTGAGCATCTTCTAGCAACCTTTGCCAAGTTATGTGCAGAAATCCTAGCTGCAGCTTCTGATGGTATGCTAAATATAGAAGATGCTACTGGACACTCTGTTCTTCAGGATGCTTTTCAAATTCTCGGCTGTAAAGAGTTACGCATCCCATCTACTCGTGCATCATCTGAGTCAGCAGATGTAGAGGAGGAAGGGGGAGAAAGTGGATCTGCAGCTAGAGGAAGGGCTATAACTCAGGCAGTCAAAAAGGGCCTTATCCAAAATACAGTCCCCATCTTCATAGAGTTGAAACGTCTATTGGAAACCAAGAATAGTCCCCTCATAGGTTCTCTTATGGAGTGCCTCCGCATCATTCTAAAGGACTACAAGAATGAGATTGATGACATATTGGTTGCTGATAAGCAGCTGCAGAAAGAGCTTATTTAtgatattcaaaaatatgaagCAGCAAAAGCTAAAGCAACAGTGGCTGAGGCCGTGGGCACTAAGCCAAAATCTGGTTCAAATCAATCACCTGATGTTTCTAAGAACCTGACCAAGACACAAGGACAAACAGTTGGACAAAGTAAGTACAGTAAAGAGCTTCCAAGTGATTCAAGAGTTGCTTCAGCAATGGCAGATGCAGCAGCTGCAGCGACAGCTCGTTCTGTGCTCAGGGAAATAAACAAGGGGACGGGTACACCACCACTTCGTTCTTTGAGTGTTCCTAAAGTCAAGTCTTGTACTGGTATGCACAATTCCAAATGCATGGATGTCATACAATCTTTGAGGAAAAAGCAGTCTTTTGATTCTGATGAAGAAAACTAA 3774 0.4677 MDSCPPHHSLVASDVFLSLLLSPNAPVFTLFTPISFLSFLRSLRRACKARSQPGPAQDSSQNRKRRRPGRARARHPQNDDDSPDAGSRNDPRAIVRVLEKLVQVMGSIHLDRFLETLKSLIQTVAEIPVTALDTCGNAAQYSNLLNLCAKVLNEVLKPEHGEPSDTAAEVLKSLCSLVLMPKSQARTFALGFVTSLGRECDGVRKALAHFPRYLARKAPEKAEPRALAVDSIMEVVRVVDVEDQIAFVKFVVQMAQGKSNLRLLAVDLVLNLVTSLRDPLGVDSGSEAWGVWCLEALVKRCSDVNAAIRARALSNLAQLVGFLSRDDRTSVVLKEFMGFGKGGDGDGEGGMNDMLRRRCMDDKAAVRKSALLLVTNLTALLGGAIDEVVLKTMGMACSDPLISMRKAAITALSEAFRTFSAETVITEWLHSVPRLITDNESSIQEECENMFQELVLDRISRAASATSSYSVSSSNRKMKGKGIDNEMEMLFPNGILYFLREICNGEVSPWVKKICTKLGKKKRLNHKIVTALQNIIRASESIWLSHSMPIEKWTAPPGAWFLLSEVSTFLSKAVDWEFLHHHWQLLDKHEVEGEFKSPFVQRNACAEEESIECNPVAWASDRVFLLQTISNVSVELPSEPAADLAHNLLKRVEEFNMHSTEVDAHLKALKTLCKRKASNLKEAEALVLKWVHQVLSRASEIIEKFISENSEQNTQGSFFTPPRSGTRKGSKSVAMSKSLSKAVTAIYTVGSLVIVSPSADMSNVVPLLHTIITSGSSGLKLNKLPGPATSLQQEAPSFYIQGWLAMGKLCLADGKLAKNYIPLFVQELEKSESAALRNNIVVMMADFCVRYTALVDCYITKITRCLLDPCELVRRQTFILLSRLLQRDYVKWRGVLFLRFLLSLVDESEKIRQLADFLFGNILKVKSPLLAYNSFVEAVFVLNDCRAHNGHRESHGSGMESQLFSIRGTDEKSRSKRMHIYVSLLKQMAPEHLLATFAKLCAEILAAASDGMLNIEDATGHSVLQDAFQILGCKELRIPSTRASSESADVEEEGGESGSAARGRAITQAVKKGLIQNTVPIFIELKRLLETKNSPLIGSLMECLRIILKDYKNEIDDILVADKQLQKELIYDIQKYEAAKAKATVAEAVGTKPKSGSNQSPDVSKNLTKTQGQTVGQSKYSKELPSDSRVASAMADAAAAATARSVLREINKGTGTPPLRSLSVPKVKSCTGMHNSKCMDVIQSLRKKQSFDSDEEN 1257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1325 1257 MobiDBLite consensus disorder prediction 1042 1062 - -
Ssu1g1325 1257 MobiDBLite consensus disorder prediction 1151 1185 - -
Ssu1g1325 1257 SUPERFAMILY ARM repeat 243 1113 IPR016024 -
Ssu1g1325 1257 MobiDBLite consensus disorder prediction 49 90 - -
Ssu1g1325 1257 Pfam non-SMC mitotic condensation complex subunit 1 836 1013 IPR032682 -
Ssu1g1325 1257 PANTHER CONDENSIN 5 1245 IPR026971 GO:0007076
Ssu1g1325 1257 MobiDBLite consensus disorder prediction 73 87 - -
Ssu1g1325 1257 Coils Coil 1108 1128 - -
Ssu1g1325 1257 PANTHER CONDENSIN-2 COMPLEX SUBUNIT D3 5 1245 - -
Ssu1g1325 1257 Coils Coil 666 686 - -
Ssu1g1325 1257 Gene3D - 293 464 IPR011989 -
Ssu1g1325 1257 MobiDBLite consensus disorder prediction 1147 1185 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1325 K11491 - gmx:100781242 2101.63