Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1313 ATGGCACGCTCTTTCTCACAAGCCAAACGCGCCCTTGCCTCTGCTCTTCATCGGCGTGGCTACGCGGTGGCATCTGATGTTTCCGTGAGAGGTGGATTTGATAGGATTGGGAATAGGAGCGGAATGGTGGTGGGGAAGGTGGAAGAGAAGGGTGTGACAAAAAATGGTTCGGGGGCCTCATCAGCCTGGGCCCCGGACCCAGTCACGGGTTACTACAGGCCCATCAATCACGCCGATGAGATTGACCCGGTGGAGCTCCGACACATGCTGCTGAATCACAAAGTCAGATCATCATCCCCCTAG 303 0.5611 MARSFSQAKRALASALHRRGYAVASDVSVRGGFDRIGNRSGMVVGKVEEKGVTKNGSGASSAWAPDPVTGYYRPINHADEIDPVELRHMLLNHKVRSSSP 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1313 100 Pfam Late embryogenesis abundant protein 1 91 IPR004926 -
Ssu1g1313 100 PANTHER LATE EMBRYOGENIS ABUNDANT PROTEIN 2-RELATED 1 99 IPR004926 -
Ssu1g1313 100 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 1 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1313 Ssu-Chr1 29101400 29101990 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1313 - - aprc:113852882 144.05