Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1309 atgagcgaAGACGCGAAAAAGAGCATTGCCGGAGCTCTAACGGCGAGGCCCAACTCCGATGACCGGAAACCGTTTCCGTTACCGGCGCCGGCGCCAACCGCCGTTCCCCCGAAGAAGGTCATCATCAAGAGCGCCGACATGATCCCCGACATGCAGAAGGAGGCCGTTGATATCGCCGTCGCCGCGTTTGAGAGGTACAATGTGGAGAAAGATGTTGCGGAGCAGATAAAGAAGGAGTTCGATAAGAGGCATGGCCCCACTTGGCATTGCATCGTTGGTCgtaattttgGCTCCTATGTGACTCATGAAACAAACCACTTCGTTTATTTCTATTTGGATCTGAAAGCGGTTTTACTCTTCAAATCTGGCTAG 372 0.5054 MSEDAKKSIAGALTARPNSDDRKPFPLPAPAPTAVPPKKVIIKSADMIPDMQKEAVDIAVAAFERYNVEKDVAEQIKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDLKAVLLFKSG 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1309 123 SUPERFAMILY DLC 34 123 IPR037177 GO:0007017|GO:0030286
Ssu1g1309 123 Gene3D Protein Inhibitor Of Neuronal Nitric Oxide Synthase; 37 123 IPR037177 GO:0007017|GO:0030286
Ssu1g1309 123 PANTHER DYNEIN LIGHT CHAIN 5 123 IPR001372 GO:0007017|GO:0030286
Ssu1g1309 123 ProSitePatterns Dynein light chain type 1 signature. 89 103 IPR019763 GO:0005875|GO:0007017
Ssu1g1309 123 MobiDBLite consensus disorder prediction 1 32 - -
Ssu1g1309 123 Pfam Dynein light chain type 1 39 122 IPR001372 GO:0007017|GO:0030286
Ssu1g1309 123 SMART Dynein_light_2 35 122 IPR001372 GO:0007017|GO:0030286
Ssu1g1309 123 PANTHER DYNEIN LIGHT CHAIN 5 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1309 Ssu-Chr1 29008104 29012857 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1309 K10418 - gmx:100777142 221.861