Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1308 ATGGTGGGTCTGAGTGTAGTGTTAGAACCACAGAAAGGTAGTGTTAGCAAGAAGACTCCACAAGTGATTAACAAAACAACGATGCTTGGCAGCATCAACAAACACTCTCCTTCTGCGGTGAATGTTTCTCAGCACTCCCGTTTTCAGGAAACAACGTTTCTAGACCTATGTTTTCTCTGCAGGAAGAGACTCTTGCCCGGGAAAGACATCTACATGTACAAAGGGGACAGGGCGTTCTGTAGCGTGGAGTGCAGGTGCAAGCAGATTTTCATGGATGAGGAAGAGAGTATTCAGAAAGAGAACTGTTCTTTGGCTGCTATGAGACCCACATCGTCCGCTTCTTCCTCAGAAGCTCGTCATCATCAGAAAGGAGCAACAAATTGA 384 0.4609 MVGLSVVLEPQKGSVSKKTPQVINKTTMLGSINKHSPSAVNVSQHSRFQETTFLDLCFLCRKRLLPGKDIYMYKGDRAFCSVECRCKQIFMDEEESIQKENCSLAAMRPTSSASSSEARHHQKGATN 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1308 127 MobiDBLite consensus disorder prediction 108 127 - -
Ssu1g1308 127 PANTHER FCS-LIKE ZINC FINGER 5 1 125 - -
Ssu1g1308 127 PANTHER FCS-LIKE ZINC FINGER 15 1 125 - -
Ssu1g1308 127 ProSiteProfiles Zinc finger FLZ-type profile. 52 96 IPR007650 -
Ssu1g1308 127 Pfam zinc-finger of the FCS-type, C2-C2 45 94 IPR007650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1308 Ssu-Chr1 28997673 28998328 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1308 - - gmx:100818870 179.874