Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1303 ATGATCTTAGTGGATGTACGGACTCCTGGTGTTCACATAAAGAGACCATTGACAGTGTTTGGCTTTGATGATGCTCCTCATGGGCATGCAGAAGTAACATTTGAAAATGTTTGTGTGCCAGCAAAAAACATCATACTTGGTGAAGGACGTGGATTTGAGATTGCTCAAGGTAGGCTTGGTCCTGGAAGGCTGCACCATTGTATGAGACTGATAGGTGTTGCTGAGCGAGGCATGCATATGATGGTTCAAAGAGCTGTTAGTAGAAGAACATTTGGGAAGTTGATTGCTCAACATGGTTCATTTCTTTCAGATATGGCCAAGTGCCGAATAGAGCTGGAGAAGACCAGATTGCTAGTGTTGGAAGCAGCTGACCAACTCGATAGGCATGGGAACAAAAAAGCTCGAGGGATATTAGCAATGGCAAAGGTAGCCTGCGCCGAATATGGCACTGAAGGTGCTTGA 462 0.4524 MILVDVRTPGVHIKRPLTVFGFDDAPHGHAEVTFENVCVPAKNIILGEGRGFEIAQGRLGPGRLHHCMRLIGVAERGMHMMVQRAVSRRTFGKLIAQHGSFLSDMAKCRIELEKTRLLVLEAADQLDRHGNKKARGILAMAKVACAEYGTEGA 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1303 153 Pfam Acyl-CoA dehydrogenase, C-terminal domain 49 151 IPR009075 GO:0016627
Ssu1g1303 153 Gene3D - 50 153 - -
Ssu1g1303 153 SUPERFAMILY Acyl-CoA dehydrogenase NM domain-like 1 62 IPR009100 GO:0016627
Ssu1g1303 153 SUPERFAMILY Acyl-CoA dehydrogenase C-terminal domain-like 47 151 IPR036250 GO:0016627
Ssu1g1303 153 PANTHER ACYL-COA DEHYDROGENASE IBR3-RELATED 1 146 - -
Ssu1g1303 153 PANTHER MEDIUM-CHAIN SPECIFIC ACYL-COA DEHYDROGENASE, MITOCHONDRIAL-RELATED 1 146 - -
Ssu1g1303 153 Gene3D - 1 49 IPR046373 GO:0016627
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g1303 1 145 Acyl Lipid Metabolism Gene Families AT3G06810 83.448 1.67e-83 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1303 K00249 - gmx:100778771 286.574