Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1272 ATGAGGAGGAGCAGAGGTCAACGTTGTCGGAGAGCGGACCCGGTTCCTCTTCCAATTGCTCCGTTTCGTCGAGTGGAACAACGTGTGACGTGTCCAATTTGTGTCGGTTCTTGGAGCACACCACACCACATGTTCCCGCCCAATATTTCCCCACGtgaaagTGATATGTGCTTCATGGATTACTTTAAGAGTGTACCTTGGATTGAGAGAAGTAAGAGGAGATGGAAAACGATGGAGGGAGAGTTGCATGCGTACTTTGTGCTTGGGGACTTGTGGGAATCTTTTAAGGAATGGAGTGCATATGGGGCCGGTGTTCCGTTGGTGTTAGATGGGAGTGAAGGCGTCACACAGTATTACAATGTCTCCTTGTCTGCCATTCAGCTTTATGTTGATCCATCAAAACCTTTCCCCCGGTTAAGGAGACCCAGTCAGGAGAGTGACTCTGAATCAGCTAGAGAGACAAGCAGTGATAGCAGCAGTGGCTATTGTCATGAAAGAGGGGCAAAGATTGTTCATGGCAGTTGGAACCAGCCTAACTTGTCAGATGCAAGCAATCACGGTTTGGAAAGAGTCACTAACAAGTAA 585 0.4769 MRRSRGQRCRRADPVPLPIAPFRRVEQRVTCPICVGSWSTPHHMFPPNISPRESDMCFMDYFKSVPWIERSKRRWKTMEGELHAYFVLGDLWESFKEWSAYGAGVPLVLDGSEGVTQYYNVSLSAIQLYVDPSKPFPRLRRPSQESDSESARETSSDSSSGYCHERGAKIVHGSWNQPNLSDASNHGLERVTNK 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1272 194 MobiDBLite consensus disorder prediction 137 194 - -
Ssu1g1272 194 MobiDBLite consensus disorder prediction 174 194 - -
Ssu1g1272 194 Pfam Protein of unknown function (DUF789) 77 177 IPR008507 -
Ssu1g1272 194 PANTHER OS07G0246600 PROTEIN 70 173 - -
Ssu1g1272 194 MobiDBLite consensus disorder prediction 138 152 - -
Ssu1g1272 194 PANTHER T15D22.8 70 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1272 Ssu-Chr1 28111127 28114805 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1272 - - gmx:100796604 198.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g1272 1 28111127 28114805 Ssu1g1272 1 28111127 28114805 ECH