Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1260 ATGGCAGGGTGCGAGAAGGAAGAGTATTTCGTTGCCCCGGATGCTGAGACCACATCCGCGGGAAAGTACGGTAGGCTTGCCCCAAAGAAGAAGCCTTTGATATCGAAAGATAATGAAAGAGCATTCTTTGATTCAGCAGACTGGGCATTATGCAAGCAAGGTGCTGGAGTGAATCAACAATCTACAGCAGCCGTGGAGACACTGCGACCAAAACTACAGaGAACTCCACATCAGCAGCTTCCTCCAAGACGACCTGCATGCACATCCTGGCCGAGATAA 279 0.5018 MAGCEKEEYFVAPDAETTSAGKYGRLAPKKKPLISKDNERAFFDSADWALCKQGAGVNQQSTAAVETLRPKLQRTPHQQLPPRRPACTSWPR 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1260 92 MobiDBLite consensus disorder prediction 69 92 - -
Ssu1g1260 92 PANTHER CAMP-REGULATED PHOSPHOPROTEIN 19-RELATED PROTEIN 1 89 - -
Ssu1g1260 92 Pfam cAMP-regulated phosphoprotein/endosulfine conserved region 16 87 IPR006760 -
Ssu1g1260 92 PANTHER CAMP-REGULATED PHOSPHOPROTEIN 19-RELATED PROTEIN 1 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1260 Ssu-Chr1 27863899 27866347 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1260 - - gmx:100527098 176.792
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g1260 1 27863899 27866347 Ssu1g1260 1 27863899 27866347 ECH