Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1259 ATGGCTTGTCAAAATGACAAAAGCCTATTATTGGCCATTGGGTTAGTGCTTTGTGTCACCCTGACCTTCCCTAGGGTCGGGGAAGGGAGGGTGCCCTTTGCATGCGACCCTAGGAACGGGTTAACGAGGGGGTTCAAGTTCTGTAGGACAAACGTGCCCATCCACGTGAGGGTGCAAGACCTCATAGCGAGGCTGACATTGCCTGAAAAGATAAGACTAGTTGTGAACAATGCCATTGCGGTGCCGAGGCTTGGCATCCAAGGCTACGAGTGGTGGTCAGAGGCACTACACGGCGTTTCCAATGTGGGGCCCGGTACCAAGTTCGGTGGGGCCTTCCCTGGGGCCACCATGTTCCCTCAAGTCATCACAACCGCTGCTTCCTTCAATCAGTCGCTGTGGCAGGAAATTGGACGGGTGGTGTCTGATGAAGCAAGAGCTATGTACAACGGTGGACAGGCTGGTTTGACGTATTGGAGTCCTAATGTGAACATTTTCCGTGACCCACGGTGGGGCCGCGGCCAAGAGACTCCCGGCGAAGACCCGACTTTGGCCGCAAAATACGCTGCCAGCTATGTCCGAGGACTCCAAGGCAACGGTGCCGGTAACCGCCTCAAGGTTGCTGCTTGTTGTAAACACTACACTGCCTATGATCTTGATAACTGGAATGGTGTGGACAGGTTTCATTTCAACGCCAGGGTGAGCAAGCAGGATTTGGAGGACACTTATAACGTTCCATTTAAAGCCTGCGTGTTGGAAGGGCAAGTGGCGAGTGTGATGTGCTCCTATAATCAGGTGAATGGCAAGCCTACGTGTGCTGATCCTGATCTCCTTCGCAACACCATCCGTGGCCAGTGGCGCCTCAATGGGTACATTGTCTCGGACTGTGACTCAGTTGGAGTTTTCTTTGACAACCAACACTACACAAGAACACCCGAGGAGGCAGCCGCAGAGGCCATTAAAGCGGGCCTGGACTTGGACTGTGGCCCATTCTTGGCCCTCCACACCGACACTGCCATTAGTAGGGGACTCATTTCCGAAAACGATCTTAACCTTGCCTTAGCCAACCTTGTCACGGTCCAAATGAGATTGGGAATGTTCGACGGCGAACCATCGATCCAACCATATGGAAACTTGGGCCCAAGAGATGTGTGCACCCCGGCCCATCAACAACTAGCCCTTGAAGCAGCTAGGGAGAGTATAGTCCTGCTacaaaacaaaggaaactcCCTACCATTATCCCCAGCGCGACACCGTCTCGTAGGAGTCATTGGACCCAATTCAGACGCTACCGTTACAATGATCGGGAACTATGCTGGTGTGGCATGTGGTTATACTACGCCTTTGCAAGGGATAGCAAGGTATGTGAAGACTGCTCATCAAGTGGGATGTAGGGATGTGGCTTGTACGGGAAACCAACTATTTGGATCCGCAGAGACTATAGCTAGGCAGGCTGATGCGACTGTGTTAGTAATGGGCCTTGACCAGTCCATAGAAGCGGAAACAAGAGACAGGCTTGGGCTGCTCTTACCAGGCTTCCAACAGGAGCTTGTGTCCAGGGTGGCCAGGGCCGCCACAGGCCCAGTTATCTTGGTCATCATGTCTGGTGGCCCAGTTGATGTCTCGTTTGCCGTGAATGACCCCAAGATTAGTGCCATTCTGTGGGTTGGTTACCCTGGCCAGGCTGGAGGAACTGCCATAGCTGATGTGATCTTTGGCACAACTAACCCAGGAGGAAGGTTACCCATGACATGGTACCCACAGAGGTATTTGGCTAAAGTGCCCATGACAAACATGGACATGCGTCCAAACCCAGCAACTGGGTACCCAGGAAGGACCTACAGATTCTACAAAGGTCCAGTAGTGTTCGCTTTCGGACATGGGCTGAGTTACTCAAGATTCTCCCACAGCTTAGCCCTTGCTCCCAAACAGGTCTCAGTGCCCATAGAGAGCCTTCAGGCCTTGACAAACACAACCCTTTCAAGCAAAGCAGTGAGGGTGAGTCACGCCAATTGTGACGATGCATTGGAGATGGAATTCCACGTTGACGTGAAAAACGAAGGGTCAATGGATGGGGCTCACACCCTTCTCGTATTCTCAAAACCACCCCCGGGAAAATGGTCCTCAATTAAACAATTGGTGAGCTTCCACAAGACCCACGTTCCTGCTGGCTCAAAGCAGCAAGTCAAGGTTGGTGTTCATGTGTGCAAGCACCTATCCGTTGTGGACCAGTTCGGGATTCGAAGAATCCCAACCGGTGAACATGAACTCCACATTGGGGATGTCAAACACTCAATTTCTGTCCAAACTCCGCAAGAAATCAAGCATTAA 2328 0.518 MACQNDKSLLLAIGLVLCVTLTFPRVGEGRVPFACDPRNGLTRGFKFCRTNVPIHVRVQDLIARLTLPEKIRLVVNNAIAVPRLGIQGYEWWSEALHGVSNVGPGTKFGGAFPGATMFPQVITTAASFNQSLWQEIGRVVSDEARAMYNGGQAGLTYWSPNVNIFRDPRWGRGQETPGEDPTLAAKYAASYVRGLQGNGAGNRLKVAACCKHYTAYDLDNWNGVDRFHFNARVSKQDLEDTYNVPFKACVLEGQVASVMCSYNQVNGKPTCADPDLLRNTIRGQWRLNGYIVSDCDSVGVFFDNQHYTRTPEEAAAEAIKAGLDLDCGPFLALHTDTAISRGLISENDLNLALANLVTVQMRLGMFDGEPSIQPYGNLGPRDVCTPAHQQLALEAARESIVLLQNKGNSLPLSPARHRLVGVIGPNSDATVTMIGNYAGVACGYTTPLQGIARYVKTAHQVGCRDVACTGNQLFGSAETIARQADATVLVMGLDQSIEAETRDRLGLLLPGFQQELVSRVARAATGPVILVIMSGGPVDVSFAVNDPKISAILWVGYPGQAGGTAIADVIFGTTNPGGRLPMTWYPQRYLAKVPMTNMDMRPNPATGYPGRTYRFYKGPVVFAFGHGLSYSRFSHSLALAPKQVSVPIESLQALTNTTLSSKAVRVSHANCDDALEMEFHVDVKNEGSMDGAHTLLVFSKPPPGKWSSIKQLVSFHKTHVPAGSKQQVKVGVHVCKHLSVVDQFGIRRIPTGEHELHIGDVKHSISVQTPQEIKH 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1259 775 Gene3D - 57 373 IPR036962 GO:0004553|GO:0005975
Ssu1g1259 775 PANTHER SUGAR HYDROLASE-RELATED 13 770 IPR044993 GO:0009044|GO:0045493
Ssu1g1259 775 Pfam Glycosyl hydrolase family 3 N terminal domain 112 327 IPR001764 GO:0004553|GO:0005975
Ssu1g1259 775 Pfam Fibronectin type III-like domain 696 760 IPR026891 -
Ssu1g1259 775 PANTHER BETA-D-XYLOSIDASE 1 13 770 - -
Ssu1g1259 775 Gene3D - 386 631 IPR036881 GO:0004553|GO:0005975
Ssu1g1259 775 SUPERFAMILY (Trans)glycosidases 46 399 IPR017853 -
Ssu1g1259 775 SMART Fn3_like_2 693 762 IPR026891 -
Ssu1g1259 775 PRINTS Glycosyl hydrolase family 3 signature 280 298 IPR001764 GO:0004553|GO:0005975
Ssu1g1259 775 PRINTS Glycosyl hydrolase family 3 signature 118 137 IPR001764 GO:0004553|GO:0005975
Ssu1g1259 775 PRINTS Glycosyl hydrolase family 3 signature 206 222 IPR001764 GO:0004553|GO:0005975
Ssu1g1259 775 Gene3D Immunoglobulins 654 775 IPR013783 -
Ssu1g1259 775 Pfam Glycosyl hydrolase family 3 C-terminal domain 400 630 IPR002772 GO:0004553|GO:0005975
Ssu1g1259 775 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 400 633 IPR036881 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1259 Ssu-Chr1 27847023 27853418 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g1259 1 771 Glycoside Hydrolase AT5G49360 72.343 0.0 1147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1259 - - gmx:100805839 1462.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g1259 1 27847023 27853418 Ssu1g1259 1 27847023 27853418 ECH