Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1250 ATGAACCACAACACCAGCAGTAACTTGGAGACTCGGTCTCTGCTTGATGAGCTTTGTAACTTCGATAAGAAGGGCCTCTTCGACCTTGGACACCCTCTTCTCAACCGCATCGCTGAGAGCTTCGTCAAAGCTGCTGGAATAGGAGCGGTTCAAGCTGTGTCCCGTGAGGCTTATTTCACAGCCACTGAGGGTACCGGGACTGAAAATAGTGGAGGTTTGCCGTCAGAAATTTCAGGTGCAAAGAAAAATCATTTGCCAGGTCTTAGAGGAGAGACAAGTAGCAAATCTCTTGAGGCCATGGTGAAGAGCACGGGCAAAGAGTCCTTACAATGGGGAGTGGCTGCAGGATTATATTCAGGTCTCACATATGGGCTGAAGGAAGCTCGTGGAGCACATGACTGGAAAAACAGTGCAGTTGCGGGAGCAATCACTGGGGCGACCCTTGCACTTACATTAGAAGACTCCAATCATGAACAGATTGTGCAATGTGCTATCACTGGAGCCGCTATCTCCACTGCTGCAAATCTTCTCACTGGGATTTTCTAA 546 0.489 MNHNTSSNLETRSLLDELCNFDKKGLFDLGHPLLNRIAESFVKAAGIGAVQAVSREAYFTATEGTGTENSGGLPSEISGAKKNHLPGLRGETSSKSLEAMVKSTGKESLQWGVAAGLYSGLTYGLKEARGAHDWKNSAVAGAITGATLALTLEDSNHEQIVQCAITGAAISTAANLLTGIF 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1250 181 Pfam Tim17/Tim22/Tim23/Pmp24 family 34 171 - -
Ssu1g1250 181 PANTHER OUTER ENVELOPE PORE PROTEIN 16-2, CHLOROPLASTIC 7 181 - -
Ssu1g1250 181 MobiDBLite consensus disorder prediction 63 91 - -
Ssu1g1250 181 PANTHER TIM23 7 181 IPR045238 GO:0022857
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1250 - - gmx:100305849 317.39