Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1230 ATGAAAACCCAAATCCCCTCCCTCACCCACCTCTCCATAACCCTCCTCCTGTGCCTCGCATTAAGCCCATGCACCGCCACTTTCAACGACGCGCCCACCTTCGAAACGGAGGCAGACCCACCGCTCGCGTTCCCGCCTTCCAATGAGAACCCAACATCGTCCGAGGAAGGTTCGGGCCCACGCCATTTCTACACGTCGTTCTCCGCCGCCTTCGCCGACATCCTCAGGGGCGCCCTCCGCGGCGACGCCCTAACGCTCCCACCGTCACGCGTCGACCCCAAGGCCGTGCCCCACCACGACGCCGTGAAGCAGGTGTGCTCCCACACGGACTACCCCGACGCGTGCCTCGCCACCGTGGCGCCCTTCCTCGGCGGCGGCGGCGGACGCCACCACCACTTCGACGTCATGCACGTCCTCGAGGCCGCCATACGGGCCTGCTCGTTCCAGACCAACTTCACCCTCGCCGTCGTCGCCAAGCACACGGCGGGCTCGCCGGAGATGGCCGCGGCGCTCGCCGACTGCAGGGAGCAGTACGGCGACGCGCTGGGGAACCTCAAGAGGGCCCTCGAGGCCATCCCCTCGCGCGACCTCGGCACCGTCACCGTCATGCTCAGCGCCGTCATGGCGGATGTTTCGGCCTGCGAGAGTGGCTTCCAGGATCTTAAAGCGGCCTCGCCCATGGGTCAGTCTGAAGGGATGGTTACTATCACGGCCAGTAATTGTCTTGCCATTGCTTCCATGATTCCCTATTAG 753 0.6534 MKTQIPSLTHLSITLLLCLALSPCTATFNDAPTFETEADPPLAFPPSNENPTSSEEGSGPRHFYTSFSAAFADILRGALRGDALTLPPSRVDPKAVPHHDAVKQVCSHTDYPDACLATVAPFLGGGGGRHHHFDVMHVLEAAIRACSFQTNFTLAVVAKHTAGSPEMAAALADCREQYGDALGNLKRALEAIPSRDLGTVTVMLSAVMADVSACESGFQDLKAASPMGQSEGMVTITASNCLAIASMIPY 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1230 250 PANTHER PECTINESTERASE INHIBITOR-LIKE 16 248 - -
Ssu1g1230 250 MobiDBLite consensus disorder prediction 35 59 - -
Ssu1g1230 250 Pfam Plant invertase/pectin methylesterase inhibitor 101 244 IPR006501 GO:0004857
Ssu1g1230 250 Gene3D Invertase/pectin methylesterase inhibitor family protein 98 249 IPR035513 -
Ssu1g1230 250 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 100 248 IPR035513 -
Ssu1g1230 250 CDD PMEI-like_2 100 248 - -
Ssu1g1230 250 SMART PMEI_2 97 244 IPR006501 GO:0004857
Ssu1g1230 250 TIGRFAM PME_inhib: pectinesterase inhibitor domain 96 247 IPR006501 GO:0004857
Ssu1g1230 250 PANTHER PECTINESTERASE INHIBITOR-LIKE 16 248 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1230 - - gmx:102664156 256.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g1230 1 27216040 27216792 Ssu1g1230 1 27216040 27216792 ECH