Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1229 atgccaggTGTTAAGAGATTGGGCGTGGCCGTTGATTTCTCACCTTGCAGCATCAAAGCACTCAAATGGACGGTGGATAACGTCGTCAAAGAAGGGGATCACCTCATTCTTGTCGTCGTTCGCCATGCTGAGAACTACGAGCACGGCGAGATGCAGCTCTGGGAAACTACTGGCTCACCTCTCATACCTCTGGCTGAGTTCTCTGAACCTACTTTCATGAAGAGATATGAACTGAAACCCGAACCTGAAGTAATTGATATTGTCTCAACAGCTGCGAGGCAAAAAAatATTGTGGTGCTAATGAAGATCTACTGGGGAGATGCTCGGGAGAAGTTATGTGAAGCAATTGATCACGTACCTCTAGATTACCTTACCGTGGGGAACAGAGGCCTTGGCCCACTCCAAAGGGTCATAATGGGCAGCGTCAGCAACTATGTGGTGAATAATGCCACATGTCCTGTCACTGTGGTGAAGACTTCAGACCACCACCACTAA 495 0.4727 MPGVKRLGVAVDFSPCSIKALKWTVDNVVKEGDHLILVVVRHAENYEHGEMQLWETTGSPLIPLAEFSEPTFMKRYELKPEPEVIDIVSTAARQKNIVVLMKIYWGDAREKLCEAIDHVPLDYLTVGNRGLGPLQRVIMGSVSNYVVNNATCPVTVVKTSDHHH 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1229 164 CDD USP_Like 6 157 - -
Ssu1g1229 164 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 5 160 - -
Ssu1g1229 164 Pfam Universal stress protein family 4 158 IPR006016 -
Ssu1g1229 164 PRINTS Universal stress protein signature 118 130 IPR006015 -
Ssu1g1229 164 PRINTS Universal stress protein signature 4 22 IPR006015 -
Ssu1g1229 164 PRINTS Universal stress protein signature 136 158 IPR006015 -
Ssu1g1229 164 Gene3D HUPs 4 164 IPR014729 -
Ssu1g1229 164 PANTHER IMP2'P 5 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1229 Ssu-Chr1 27203088 27204355 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1229 - - gmx:100816534 291.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g1229 1 27203088 27204355 Ssu1g1229 1 27203088 27204355 ECH