Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1210 ATGGCTTCTTCGTCTTCAGCACCGGGTTCAGGTTCAGGTTCGGCGGTGACGGAGCGAAGAGGAATACCAGGGGCTCAGTTCGTAGAGGATGTCCAAACTTACCTCACCCAATCGGGCCTCGATGTTGGCTCAGCCCTCGCTTTCCTCCAAGAAAGACTTCAGCAATACAAGGTAGTAGAAATGAAGCTTCTTGCTCAGCAAAGGGATCTTCAGGCAAAGATACCAGATATTGGAAAGTGCTTAGACGTTGTTGCTACATTGCAAGCTAAGAAGGGTACTGGTGAGGAACTTATTGCTGATTTTGAAGTATCAGAAGGCATATACTCACGAGCACGCATAGAAGAAACTGATTCCGTGTGTCTATGGCTGGGAGCAAATGTTATGCTGGAATATTCATTAGAAGAGGCTACTGGTCTTCTACAGAAGAACTTGGATAATGCTAGAGCCAGTTTGGAAGTTCTTATTGCTGATCTACAGTTCTTGAGGGACCAGGTGACAATTACTCAGGTTACAATTGCTCGCGTGTATAATTGGGATGTTCATCAACGGAGAATTCAACAAGCTGCTGCTGTAACTGCTCAAGACTAG 588 0.4575 MASSSSAPGSGSGSAVTERRGIPGAQFVEDVQTYLTQSGLDVGSALAFLQERLQQYKVVEMKLLAQQRDLQAKIPDIGKCLDVVATLQAKKGTGEELIADFEVSEGIYSRARIEETDSVCLWLGANVMLEYSLEEATGLLQKNLDNARASLEVLIADLQFLRDQVTITQVTIARVYNWDVHQRRIQQAAAVTAQD 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1210 195 PANTHER PREFOLDIN SUBUNIT 3 1 190 IPR016655 GO:0006457|GO:0016272
Ssu1g1210 195 PIRSF Prefoldin_3 9 194 IPR016655 GO:0006457|GO:0016272
Ssu1g1210 195 Pfam Prefoldin subunit 56 178 IPR004127 -
Ssu1g1210 195 SUPERFAMILY Prefoldin 46 175 - -
Ssu1g1210 195 Coils Coil 144 164 - -
Ssu1g1210 195 Gene3D - 44 191 IPR009053 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1210 Ssu-Chr1 26826021 26834989 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1210 - - gmx:100527836 354.369
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g1210 1 26826021 26834989 Ssu1g1210 1 26826021 26834989 ECH