Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1198 ATGGCTGTACATTCTGATTCGGCTTCATCAGAGAAGAAATCAAGCAATGGAGTGAATGAGTTGCTGACTTTTAATGCTGAGAATATGCAaagcaacataaaaattatctattacagCCGGacatttttatctataattgGCGGAGTTGTTGCTGGTATTTTGGGATTTACAGGCTTGAAAGGATTGTGTTTTACTTACTTCTCATGGCACTTACTTCACTTGGGCTTGTGGCCAAAGCAAGATTTTCAACCCACACATACTTTGACTCCTGGAATCGAGTGCTACTTGATGGCTTTCTGGGTGGCCTAA 309 0.3722 MAVHSDSASSEKKSSNGVNELLTFNAENMQSNIKIIYYSRTFLSIIGGVVAGILGFTGLKGLCFTYFSWHLLHLGLWPKQDFQPTHTLTPGIECYLMAFWVA 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1198 102 PANTHER UNCHARACTERIZED 9 85 IPR008504 GO:0005783|GO:0016021|GO:0072546
Ssu1g1198 102 Pfam EMC6 36 74 IPR029008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1198 Ssu-Chr1 26516080 26516759 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1198 K23567 - gmx:100526986 122.864
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g1198 1 26516080 26516759 Ssu1g1198 1 26516080 26516759 ECH