Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1195 ATGAGAAGGCTAgcttacaaaataaagaaagctAATAATGCCCACTCCATGTCGATGAACTTTGAGTTGGATGTGACATATATCAAGTTCAAGATTATGTTGGACCAAGATGAAAGAGTTATTCGGCATCTTGTGATAAAGAGGGACGAGGCAATCACTGAAGATTGCCCTCCACCCCCGGAGTTTCATACTCTGCGTGCAAATGCGGATGATAATGACAGCAAAGAACTTGATGAAGATTATGATGACCGGGATGGTGATGAGGTGGATGACTATGATGACGgggatgaaattatttttatagatggtGATGAGGATGATATagattttttggattttttacaCAGACCTAATGTGAAGAGTGTAGGTTTAGTGGGTTGTATAAAGAgcTTGTACTCAAGAGAGTCTCAAAGGTCTCTTGTCTGGGCTTGTGCTCCTTATACTTGA 447 0.3602 MRRLAYKIKKANNAHSMSMNFELDVTYIKFKIMLDQDERVIRHLVIKRDEAITEDCPPPPEFHTLRANADDNDSKELDEDYDDRDGDEVDDYDDGDEIIFIDGDEDDIDFLDFLHRPNVKSVGLVGCIKSLYSRESQRSLVWACAPYT 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1195 148 MobiDBLite consensus disorder prediction 55 94 - -
Ssu1g1195 148 PANTHER 28S RIBOSOMAL PROTEIN S6, MITOCHONDRIAL 1 70 - -
Ssu1g1195 148 Gene3D - 1 55 IPR014717 -
Ssu1g1195 148 SUPERFAMILY Ribosomal protein S6 1 57 IPR035980 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Ssu1g1195 148 MobiDBLite consensus disorder prediction 74 94 - -
Ssu1g1195 148 Pfam Ribosomal protein S6 2 47 IPR000529 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Ssu1g1195 148 PANTHER MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S6 1 70 IPR000529 GO:0003735|GO:0005840|GO:0006412|GO:0019843
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1195 Ssu-Chr1 26435475 26436083 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1195 - - gmx:100790128 123.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g1195 1 26435475 26436083 Ssu1g1195 1 26435475 26436083 ECH