Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g03097 ATGGGTGGCGATAGCATAGACATGGACAAGGAGAGATTGACGGCGGAGATGGACTTCAAGGACTCATCCTCCGCCGTCATCAGAATCCGCCGCCGTCTGCCGGATTTTCTTCAGTCGGTGAAGCTAAAGTACGTGAAGTTGGGATTGGGATACGGTTATTCATGCAACGCAGCCAGCATTGTGATGGTAGCCATCACCCTTCCCATCTTCTTCTCCCTCACCGGTCTCAAACTCTCCAAACTCTGTTCCCACCAGCTCGACGTCGAGAGTGTGGCTGCCGCTTCGGCGGCGCTCCTTTCCCTCGCCGCTCTCTACTGGTGGAAGCGCTCCGGCGCAGTGTATCTGGTGGACTTCGCGTGCTACAAGCCGGAGAAAGAGAGGAAAATCTCAGTGGAGTCATTCCTTAAAATGACCGAAGAGACTGGGTTTTTCGAGGAAGAGTCTCTTCAATTCCAGAGGAAGATTTCCACGAGAGCGGGTTTGGGCGACGAGACCTACCTTCCCAGAGGAATCACTTCCCGCCCGCCCAATCTCTGCATGAGCGAAGCGCGTTTGGAGGCAGAGGCCGTGATGTTCGGGGCGTTGGACGCGCTTTTCGCGAAAACGGGCGTTGAACCGAAGGACATTGATATTCTGGTGGTGAATTGCAGTTTGTTCAACCCTACCCCTTCTCTCTCCGCCATGATTGTGAATCACTACAAGCTGAGAAGCAACATCAAGAGCTACAACCTGGGCGGCATGGGATGCAGCGCGGGACTCATTTCCGTTGACCTGGCCAAGGACCTGCTGAAAGCCAACCCCAACTCCTTCGCGGTGGTGGTCAGCACAGAGAACATAACCCTCAATTGGTACTTCGGCAACGACCGCTCCATGCTCCTCTGCAACTGCATTTTCCGAATGGGCGGCGCCGCCGTCCTCCTCTCCAACAAGCCCTCCGACCGACCTCGCTCCAAGTACGAGCTGCTCCACACCGTCCGAACCCACAAGGGCGGCGATGACAAGAACTACAACTGCGTGTACCAGAAAGAGGACGAGACCGGGAAAATAGGGGTGTGTTTGGCGCGGGAGTTAATGGCCGTGGCAGGGGACGCCCTTAAGACAAACATAACGACCTTGGGACCGTTGGTTCTGCCTTACTCGGAGCAGTTCATGTTTTTCCTGTCGCTGGTTCGGAGGAAGGTGCTGAAGATGTCGGGGGTGAAGCCGTACATCCCTGACTTCAAGCTAGCCTTCGAGCACTTCTGCATCCACGCCGGTGGAAGGGCCGTGCTTGACGAGTTGCAGAAGAATCTGGAACTGAGCGAGTGGCACATGGAGCCCTCGAGGATGACGCTCCACCGCTTCGGCAACACCTCCAGCAGCTCCCTCTGGTACGAGCTCGCCTACACCGAGGCCAAGGGTCGCGTCGCCAAGGGGGATCGGGTCTGGCAGATCGCATTCGGGTCCGGTTTCAAGTGCAACAGCGCCGTCTGGAAGGCCGTGCGCGACATCCCCGTCTTGAGGGAATGGCGTGGCAACCCCTGGGACGACTCCCTCCATCGCTATCCCCTTCATCTCCCCTCCGCCTCTTCTCCTTGA 1578 0.5716 MGGDSIDMDKERLTAEMDFKDSSSAVIRIRRRLPDFLQSVKLKYVKLGLGYGYSCNAASIVMVAITLPIFFSLTGLKLSKLCSHQLDVESVAAASAALLSLAALYWWKRSGAVYLVDFACYKPEKERKISVESFLKMTEETGFFEEESLQFQRKISTRAGLGDETYLPRGITSRPPNLCMSEARLEAEAVMFGALDALFAKTGVEPKDIDILVVNCSLFNPTPSLSAMIVNHYKLRSNIKSYNLGGMGCSAGLISVDLAKDLLKANPNSFAVVVSTENITLNWYFGNDRSMLLCNCIFRMGGAAVLLSNKPSDRPRSKYELLHTVRTHKGGDDKNYNCVYQKEDETGKIGVCLARELMAVAGDALKTNITTLGPLVLPYSEQFMFFLSLVRRKVLKMSGVKPYIPDFKLAFEHFCIHAGGRAVLDELQKNLELSEWHMEPSRMTLHRFGNTSSSSLWYELAYTEAKGRVAKGDRVWQIAFGSGFKCNSAVWKAVRDIPVLREWRGNPWDDSLHRYPLHLPSASSP 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g03097 525 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 412 492 IPR013747 -
Spst9g03097 525 SUPERFAMILY Thiolase-like 103 316 IPR016039 GO:0016746
Spst9g03097 525 Pfam FAE1/Type III polyketide synthase-like protein 108 394 IPR013601 GO:0006633|GO:0016020|GO:0016747
Spst9g03097 525 SUPERFAMILY Thiolase-like 298 494 IPR016039 GO:0016746
Spst9g03097 525 FunFam 3-ketoacyl-CoA synthase 123 493 - -
Spst9g03097 525 PIRSF Very_long_ch_3-ktacl-CoA_syn 35 524 IPR012392 GO:0006633|GO:0016020|GO:0016747
Spst9g03097 525 Gene3D - 115 494 IPR016039 GO:0016746
Spst9g03097 525 PANTHER 3-KETOACYL-COA SYNTHASE 92 517 IPR012392 GO:0006633|GO:0016020|GO:0016747
Spst9g03097 525 CDD CHS_like 114 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g03097 Spst-Chr9 64778765 64780342 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g03097 4 519 Acyl Lipid Metabolism Gene Families AT1G01120 72.624 0.0 781
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g03097 K15397 - gmx:100790385 951.814