Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g03045 ATGGATCCAGCTTTTGGAGCTTCTGCCACATATTCTAATGCAATTGAGGAGGATTTGAACCAGCTTAGGTATTCTGTCCATGAAAATTTCAACAAAGTTCAGAAGCTTGAAGAGCAAGTTGCTGAGGTTGAAAAGTTCTACAGTTCCATTAATGCCCAAGTTAATAATGCCAAAGACAAAGGCCGGGAGAAGCTTGTTATTGGCAGTAAAAGGTCACAGCAAGGTGCATCAAGAAAGGAATCTAAATCTTCAAACATAATGCAAGAGATAGCTGAGCATAAATGGGCTTGGCCTTTCTTGGAACCTGTAGATGTTGAAGGTCTTGGACTGTATGACTATCATGAGATTATTGAACAGCCTATGGATTTCAGTACGATAAAAAGGAAAATGAAGGCTAAGGATGGTTCTGGTTATAAGAACGTGCGCGAGATATATTGTGATGTCAGGTTGATTTTTAGGAATGCAATGACATACAACGATGAAAAACATGATATCCACATCATGGCGAAGTCATTGCTGGAAAAATTTGAGAAGAAATGGCTGCAGTTATTGCCTAGAGTTGTTCTGGCGGAAAAAGAACAATCAAAAGAAGAAGCACATGTGCAGTTGGAAACGCAGCGTGCTCAAGAAGCTACTTATGCCAATATGGCAAAGGATATAAGCCTTTCGATGGTTACCGTGTTGGCTTACATGTTGTTTCAGCTATGCGATGTTGAGATGCACTTGAAGAATCTCAAAGAAATGGTGATTGAAAAGTGCAGGAAAATATCAGTTCGTGAGAGACTGGAACTTGTAAAATCTTTCAACAGACTTAATCTTGACAATCTCAACAAGGCATTGCAGATAATTTGTGAGAATGACCCAACCTTCCAACCTGATGCTCCAGAAGTGAACCTTGACCTTGATAATCAGAGCGACTACACAGTATGGAGACTAAACATTTTTGTCAAAAAAGCGCTGGAAGAACAGGAAAAAAATGCTACTGAGGTTATCACTGTTAGTCATAACGTACGCAAGGCATTATCTTAG 1029 0.3965 MDPAFGASATYSNAIEEDLNQLRYSVHENFNKVQKLEEQVAEVEKFYSSINAQVNNAKDKGREKLVIGSKRSQQGASRKESKSSNIMQEIAEHKWAWPFLEPVDVEGLGLYDYHEIIEQPMDFSTIKRKMKAKDGSGYKNVREIYCDVRLIFRNAMTYNDEKHDIHIMAKSLLEKFEKKWLQLLPRVVLAEKEQSKEEAHVQLETQRAQEATYANMAKDISLSMVTVLAYMLFQLCDVEMHLKNLKEMVIEKCRKISVRERLELVKSFNRLNLDNLNKALQIICENDPTFQPDAPEVNLDLDNQSDYTVWRLNIFVKKALEEQEKNATEVITVSHNVRKALS 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g03045 342 ProSiteProfiles Bromodomain profile. 91 166 IPR001487 GO:0005515
Spst9g03045 342 Coils Coil 33 53 - -
Spst9g03045 342 PANTHER OSJNBA0053K19.4 PROTEIN 18 324 - -
Spst9g03045 342 SUPERFAMILY Bromodomain 83 187 IPR036427 GO:0005515
Spst9g03045 342 MobiDBLite consensus disorder prediction 61 84 - -
Spst9g03045 342 Gene3D - 250 326 IPR038336 -
Spst9g03045 342 PRINTS Bromodomain signature 147 166 IPR001487 GO:0005515
Spst9g03045 342 PRINTS Bromodomain signature 94 107 IPR001487 GO:0005515
Spst9g03045 342 PRINTS Bromodomain signature 110 126 IPR001487 GO:0005515
Spst9g03045 342 Pfam Bromodomain 84 170 IPR001487 GO:0005515
Spst9g03045 342 MobiDBLite consensus disorder prediction 70 84 - -
Spst9g03045 342 SMART bromo_6 72 185 IPR001487 GO:0005515
Spst9g03045 342 Pfam Bromodomain extra-terminal - transcription regulation 256 318 IPR027353 -
Spst9g03045 342 ProSiteProfiles NET domain profile. 246 327 IPR027353 -
Spst9g03045 342 Gene3D - 44 205 IPR036427 GO:0005515
Spst9g03045 342 Coils Coil 189 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g03045 Spst-Chr9 64486951 64492214 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g03045 - - gmx:100795037 431.795