Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g03034 ATGGTGGAAGAAGATGGAAAATGTGATAAAATTGCAATTTGCAATTTGCAATTTGCATGCTCACACACTCACTCTCGCTTCACTTCACACTCTCAAACTCAACTCAACAAACAAAACAAACAACACCATCCACTTCTCAATCCACCACCACTCAACACAATGCGTTCTTGGTTGTATTCTGGATTTTCGATTACCCAAAATACCCTCCCAGCGATTTATTTATTTTTTCTCCTCACAGCCCCACGCGCCTCCTCCGCTCTCAACGTCACCGCGCTCCTCTCCACCGTGCCGGACCTCTCCCAATTCACCGCCCTCCTCGCCTCCGCAACGCCACTCGCCTCCGATCTCTCCGACCGATCCTCCCTCTCCATCCTCGCCGTCCCCAATGCTTACCTCGCCGCAGATGACCACCTCGCCCGCCACCACCTTTCCCCCGCCGCTCTTGCTGACGTCCTCCGCTACCACGTCCTCCTCCAGTTCCTCTCCTGGTCGGACCTTCGCGCTCTCCCCCCCGCCGGGAAACTCGTCACCACGCTCCTCCAAACCACCGGACGCGCCACCGACAACTTCGGCTCCGTGAACCTCACGCGCGACCCCCAGTCCGGCCTCGTCTCGATCCGTTCCCCCGCCCCTTACTCCCCCTCAAACGCCACCGTTTTGTCCCTCGTGAAAACCCTACCCTACAATGTCACCATCTTCGCCGTCAATTCCCTCCTCATCCCCTACGGCCTCGACCTCATGGCCTCCGAAACCCGCCCCAACAACGTCCTCAACATCACCAAAGCCCTAATCGACGGCCACAACTTCAACGTCGCCACCTCAATGCTCGCGGCCTCCGGGGTAGTTCAGGAATTTGAGGCTGATGAGGGTGGTGCTGGAATCACTCTTTTCGTCCCTGTGGATGATGCCTTTGCTGATCTTCCACCCTCTGTGGCCCTTCAGTCTCTACCTGCAGATAAAAAAGGGGTGGTTCTTAAATTCCATGTGCTCCATTCCTATTACCCTCTTGGCTCGCTTGAATCGGTTGTTAACCCCTTCCAACCCACCCTAGCTACCGAGGCCATGGGGGCTGGTAGCTTCACGCTCAACATTTCGCGGGTGAATGGCTCCGTTGCCATCAACACCGGCATTGTGCAGGCCTCAATTACGCAGACCGTGTTTGATCAGAACCCTGTTGCCATTTTTGGGGTTTCCAAGGTTCTCTTGCCCAGGGAGTTCTTTGGCAGGAATCCAGTTGTGACTGCCAAGCCTGTTGAAGGTGCTCCTCCACCGGATGATGATGCTCTGTCGCCCGAGAATTCGCCGGGATTTGATGGACAGCCCTCTCACCTGTCGTCGCCACCGGGGTTTCGCGAAGATGTGCGGTCTCATGGTGGTGGTGGTTCCTTGTCCTTTGTTGTTGTTCTTTGCTGTATAGGATTGTATTTTGTGGTATAG 1437 0.5539 MVEEDGKCDKIAICNLQFACSHTHSRFTSHSQTQLNKQNKQHHPLLNPPPLNTMRSWLYSGFSITQNTLPAIYLFFLLTAPRASSALNVTALLSTVPDLSQFTALLASATPLASDLSDRSSLSILAVPNAYLAADDHLARHHLSPAALADVLRYHVLLQFLSWSDLRALPPAGKLVTTLLQTTGRATDNFGSVNLTRDPQSGLVSIRSPAPYSPSNATVLSLVKTLPYNVTIFAVNSLLIPYGLDLMASETRPNNVLNITKALIDGHNFNVATSMLAASGVVQEFEADEGGAGITLFVPVDDAFADLPPSVALQSLPADKKGVVLKFHVLHSYYPLGSLESVVNPFQPTLATEAMGAGSFTLNISRVNGSVAINTGIVQASITQTVFDQNPVAIFGVSKVLLPREFFGRNPVVTAKPVEGAPPPDDDALSPENSPGFDGQPSHLSSPPGFREDVRSHGGGGSLSFVVVLCCIGLYFVV 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g03034 478 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 72 453 IPR033254 -
Spst9g03034 478 SMART fasc_3 295 404 IPR000782 -
Spst9g03034 478 FunFam fasciclin-like arabinogalactan protein 4 86 241 - -
Spst9g03034 478 Gene3D FAS1 domain 79 241 IPR036378 -
Spst9g03034 478 Pfam Fasciclin domain 268 403 IPR000782 -
Spst9g03034 478 ProSiteProfiles FAS1/BIgH3 domain profile. 86 239 IPR000782 -
Spst9g03034 478 FunFam Fasciclin-like arabinogalactan protein 4 257 404 - -
Spst9g03034 478 ProSiteProfiles FAS1/BIgH3 domain profile. 256 401 IPR000782 -
Spst9g03034 478 MobiDBLite consensus disorder prediction 415 453 - -
Spst9g03034 478 SUPERFAMILY FAS1 domain 86 242 IPR036378 -
Spst9g03034 478 SUPERFAMILY FAS1 domain 263 403 IPR036378 -
Spst9g03034 478 Gene3D FAS1 domain 257 404 IPR036378 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g03034 - - pvu:PHAVU_009G244800g 751.125