Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g03006 ATGGCTGGCTTCATCACCGGCTCTCATGCTCATTCCTCACGCGACTCCGATGGGCATCATGCTCCTACCCGTCAACCTTCATCAAAAACATGTCGGGTTTGTGGTGATGAGATCGGATATAAGGAAAATGGAGAACTGTTTGTGGCTTGTCATGTGTGTGGATTTCCTGTGTGTCGACCATGTTATGAGTATGAGAGGAGTGAAGGAAACCAGAGCTGTCCTCAATGCAACACTCGCTATAAGCGCCACAAAGGCTGTCCTAGAGTGGTTGGAGATGAAGAAGAGAACTTGGATGCTGATGATTTTGATGATGAATTTCCAATTAAGAATCACCGCGAAGATCTAGATCATGTGGGAAATGGGGAGTATAATAAAGAGAAATTGCATCCCAATGGTCAAGCTTTCTCTTCAGCTGGGAGTGTTGCTGGCAAGGATTTTGATGGGGACAAAGATTTCTACAGCAATGAAGAATGGCAAGAAAGAGTCGAGAAATGGAAAGTCAGGCAAGAAAAAAAAGGTCTTCTAAACAAAGAAGACGGAAAAGAAGACCAAGGTGAAGATGATGATTACATTTTGGCTGAAGCTAGACAACCATTGTGGCGCAAGGTTCCAATATCTTCAAGCTTAATCAATCCATATCGCATAGTGATTGTGATGAGGCTGGTCATCCTCGCTTTCTTCTTTCGATTCAGAATCTTAACTCCAGCAAATGACGCATATGCCTTGTGGCTAATCTCTGTTATATGTGAGATATGGTTTGCACTGTCATGGATTCTTGATCAGTTCCCCAAGTGGTTCCCCATCACACGTGAGACTTACTTGGACCGCTTGGCCTTAAGGTTTGAGCGCGAAGGGGAGCCTAACCAACTAGCTCCAGTTGATGTGTTTGTGAGTACTGTGGACCCTTTGAAGGAACCTCCCATTATAACAGCCAACACTGTCCTTTCAATCCTCGCTGTTGACTATCCTGTTGACAAGGTCAGCTGCTATGTCTCAGATGATGGTGCATCTATGCTTCTGTTTGATTCCTTGGCAGAAACTGCTGAGTTTGCAAGAAGATGGGTTCCCTTTTGCAAGAAGTATAACATAGAGCCAAGGGCTCCTGAGTTTTACTTTTCTCAGAAAATTGATTATTTAAAAGATAAGGTGCAACCTACGTTTGTGAAGGAAAGAAGGGCCATGAAGTCTCAATATGCATTAGATGCTTGTGGTAAAACTTGTTTGTTTGCTCCACTGAAGAGAGAATATGAAGAGTTTAAGGTGAAGATTAATTCTTTGGTGGCAAAGGCTCAAAAGAAACCTGAGGATGGGTGGGTGATGCAGGATGGAACCCCATGGCCTGGGAATAACACCCGTGATCATCCAGGAATGATTCAGGTATATTTAGGAAGTGCTGGTGCACTAGATGTAGAGGGAAAGGAATTGCCGCGACTTGTGTATATTTCACGTGAAAAACGACCTGGATATCCTCACCACAAGAAAGCAGGTGCCATGAATGCTTTGGTTCGAGTTTCTGCTGTGCTTACAAATGCACCATTCATGTTGAATTTGGATTGTGATCACTACATCAATAATTGCAAGGCAATAAGAGAGGCTATGTGCTTTTTAATGGACCCCAACCTTGGGAAGAAGTTGTGCTATGTCCAATTTCCTCAAAGATTTGATGGTATTGATCGCCATGATAGATATGCTAATCGCAACACTGTGTTCTTTGATATCAATATGAAAGGGCTTGACGGGATTCAAGGTCCAGTATATGTTGGTACTGGAACTGTGTTCAACAGGCAGGCATTGTATGGTTATGATCCACCGGTATCTGAGAAAAGACCTAAGATGACATGTGACTGTTGGCCATCATGGTGTTGCTTTTGTTGTGGTGGTTCAAGAAAGTCCAAGTCAAAAAAGAAATCAGAAAAAGGTCTGTTTAGTGTATTCTCCAAGAACAAGAACAAAAAGAAAATGATGGGGAAAGACTATGTTAGAAAAGGATCAGGCTCCATGTTTGATCTTGAGGAGATTGAAGAAGGGCTTGAAGGGTATGAGGACTTAGAGAAATCATCCCTCATGTCCCAGAAAAGTTTTGAGAAACGATTCGGGCAATCACCAGTTTTCATTGCTTCCACATTGATGGAAAATGGAGGACTTCCTGAAGGCACAAATAGCCAATCATTGGTCAAGGAGGCCATTCATGTTATAAGTTGTGGCTATGAAGAGAAGACTGAATGGGGAAAAGAGATTGGGTGGATTTATGGTTCAGTCACAGAAGATATTTTGACTGGATTCAAGATGCATTGTAGAGGATGGAAATCAGTATATTGCATGCCAAAGAGACCAGCTTTCAAGGGATCTGCCCCAATAAATCTATCAGATAGGTTGCACCAAGTTCTGAGGTGGGCTCTTGGTTCTGTTGAGATTTTCCTTAGCCGTCACTGCCCCTTGTGGTATGGTTATGGAGGAAAACTTAAGTACCTAGAGAGGCTAGCTTACACTAACACCATTGTTTATCCATTCACTTCCATCCCTCTGCTCGCGTACTGCACAATTCCCGCTGTGTGTCTCTTGACAGGAAAGTTCATCATCCCCACATTGACCAACCTTGCTAGTGTTTGGTTTATGGCTCTATTTATCTCCATCATCTTAACAAGTGTGCTTGAGCTCCGATGGAGTGGTGTTACAATTGAAGCCCTGTGGAGAAACGAGCAATTTTGGGTCATAGGAGGTGTTTCCGCTCACCTTTTTGCTGTGTTTCAAGGTCTCCTCAAAGTTCTTGCTGGAGTAGACACGAATTTCACAGTCACAGCAAAAGCAGCAGAAGACACTGAATTTGGAGAGCTCTATCTCTTTAAGTGGACCACTCTTCTCATCCCTCCAACCACTCTTATAATCTTGAACATTGTTGGTGTTGTGGCTGGAGTCTCTGATGCCATAAACAATGGATATGGTTCATGGGGACCTTTGTTTGGGAAGTTGTTCTTTGCCTTTTGGGTCATTGTTCACTTGTACCCTTTCCTCAAAGGTCTCATGGGGAAGCAAAACAGGACTCCTACCATTGTGGTCTTGTGGTCAATCCTTCTAGCATCTATTTTCTCATTGATTTGGGTCAGGATCGATCCCTTCTTGCCCAAGCAAACAGGTCCAGTGCTCAAACAATGTGGGGTGGAATGCTAA 3168 0.4331 MAGFITGSHAHSSRDSDGHHAPTRQPSSKTCRVCGDEIGYKENGELFVACHVCGFPVCRPCYEYERSEGNQSCPQCNTRYKRHKGCPRVVGDEEENLDADDFDDEFPIKNHREDLDHVGNGEYNKEKLHPNGQAFSSAGSVAGKDFDGDKDFYSNEEWQERVEKWKVRQEKKGLLNKEDGKEDQGEDDDYILAEARQPLWRKVPISSSLINPYRIVIVMRLVILAFFFRFRILTPANDAYALWLISVICEIWFALSWILDQFPKWFPITRETYLDRLALRFEREGEPNQLAPVDVFVSTVDPLKEPPIITANTVLSILAVDYPVDKVSCYVSDDGASMLLFDSLAETAEFARRWVPFCKKYNIEPRAPEFYFSQKIDYLKDKVQPTFVKERRAMKSQYALDACGKTCLFAPLKREYEEFKVKINSLVAKAQKKPEDGWVMQDGTPWPGNNTRDHPGMIQVYLGSAGALDVEGKELPRLVYISREKRPGYPHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHYINNCKAIREAMCFLMDPNLGKKLCYVQFPQRFDGIDRHDRYANRNTVFFDINMKGLDGIQGPVYVGTGTVFNRQALYGYDPPVSEKRPKMTCDCWPSWCCFCCGGSRKSKSKKKSEKGLFSVFSKNKNKKKMMGKDYVRKGSGSMFDLEEIEEGLEGYEDLEKSSLMSQKSFEKRFGQSPVFIASTLMENGGLPEGTNSQSLVKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWKSVYCMPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYGYGGKLKYLERLAYTNTIVYPFTSIPLLAYCTIPAVCLLTGKFIIPTLTNLASVWFMALFISIILTSVLELRWSGVTIEALWRNEQFWVIGGVSAHLFAVFQGLLKVLAGVDTNFTVTAKAAEDTEFGELYLFKWTTLLIPPTTLIILNIVGVVAGVSDAINNGYGSWGPLFGKLFFAFWVIVHLYPFLKGLMGKQNRTPTIVVLWSILLASIFSLIWVRIDPFLPKQTGPVLKQCGVEC 1055
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g03006 1055 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 428 602 IPR029044 -
Spst9g03006 1055 FunFam Cellulose synthase 14 105 - -
Spst9g03006 1055 SUPERFAMILY Nucleotide-diphospho-sugar transferases 306 859 IPR029044 -
Spst9g03006 1055 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 13 105 IPR013083 -
Spst9g03006 1055 Pfam Cellulose synthase 412 1048 IPR005150 GO:0016020|GO:0016760|GO:0030244
Spst9g03006 1055 Pfam Cellulose synthase 293 398 IPR005150 GO:0016020|GO:0016760|GO:0030244
Spst9g03006 1055 Pfam Zinc-binding RING-finger 22 96 IPR027934 -
Spst9g03006 1055 CDD mRING-HC-C4C4_CesA 29 79 - -
Spst9g03006 1055 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 196 1022 - -
Spst9g03006 1055 MobiDBLite consensus disorder prediction 1 30 - -
Spst9g03006 1055 FunFam Cellulose synthase 428 602 - -
Spst9g03006 1055 SUPERFAMILY RING/U-box 15 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g03006 Spst-Chr9 64144895 64150378 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g03006 15 1055 Glycosyltransferase AT5G05170 65.308 0.0 1433
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g03006 K10999 - gmx:100781996 1974.9