Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02975 ATGCAAGTCTCCTCAATCAGTATAGCAGCTAAGGTTCCTCTTCGGGTGAAGTCACTGCACACAAACCCAGCAACCATTAACGACCCTTCTTCCACGGCTACGGTGGCTGCTCCTAAGTGGGCTCAAAAGACTATAACTTTGCCTCCCCTTAAACGTGGTTGTCATCACGTAACTTCAAAGATAGTGAAAGAAGTTGGGCAAGAATTGTCTGGATTCAAGTGTGGTCTGGCTCATCTCTTCTTGCATCACACAAGTGCTTCTCTCACCATCAATGAAAATTATGACTATGATGTTCGGGATGATACAGAAACATTCCTCAATCGTTTAGTTCCAGAGGGGCCATCTGCACCATGGAAGCACACTCTGGAGGGACCAGATGACATGCCAGCACATATTAAATCATCAATGTTTGGTTGTGCACTCACGATACCGATCACAAATGGAAAGCTTAATATGGGGACATGGCAGGGTATATGGCTTTGTGAACATAGGGATTATCCTACATCGCGAACGATTGTCGTTACTCTCAATGGAATATGA 540 0.4481 MQVSSISIAAKVPLRVKSLHTNPATINDPSSTATVAAPKWAQKTITLPPLKRGCHHVTSKIVKEVGQELSGFKCGLAHLFLHHTSASLTINENYDYDVRDDTETFLNRLVPEGPSAPWKHTLEGPDDMPAHIKSSMFGCALTIPITNGKLNMGTWQGIWLCEHRDYPTSRTIVVTLNGI 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02975 179 Pfam Uncharacterised protein family UPF0047 57 175 IPR001602 -
Spst9g02975 179 FunFam Secondary thiamine-phosphate synthase enzyme 30 178 - -
Spst9g02975 179 SUPERFAMILY YjbQ-like 40 178 IPR035917 -
Spst9g02975 179 NCBIfam secondary thiamine-phosphate synthase enzyme YjbQ 51 178 IPR001602 -
Spst9g02975 179 Gene3D - 31 178 IPR035917 -
Spst9g02975 179 PANTHER UNCHARACTERIZED PROTEIN YJBQ-RELATED 32 179 IPR001602 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02975 Spst-Chr9 63838427 63840340 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02975 - - gmx:100500593 341.658